RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.54□□□□□ -1.04
MDC1-203ENST00000417033 PACSIN1Q9BY11 444 aa8.54□□□□□ -1.04
MDC1-203ENST00000417033 NUCKS1Q9H1E3 243 aaKnown RBP8.54□□□□□ -1.04
MDC1-203ENST00000417033 FAM124BQ9H5Z6 455 aaPredicted RBP8.54□□□□□ -1.04
MDC1-203ENST00000417033 NHEJ1Q9H9Q4 299 aaPredicted RBP8.54□□□□□ -1.04
MDC1-203ENST00000417033 SLC24A3Q9HC58 644 aa8.54□□□□□ -1.04
MDC1-203ENST00000417033 NGRNQ9NPE2 291 aaKnown RBP8.54□□□□□ -1.04
MDC1-203ENST00000417033 NPDC1Q9NQX5 325 aaPredicted RBP8.54□□□□□ -1.04
MDC1-203ENST00000417033 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.54□□□□□ -1.04
MDC1-203ENST00000417033 NENFQ9UMX5 172 aa8.54□□□□□ -1.04
MDC1-203ENST00000417033 PCDHGC3Q9UN70 934 aa8.54□□□□□ -1.04
MDC1-203ENST00000417033 TFR2Q9UP52 801 aa8.54□□□□□ -1.04
MDC1-203ENST00000417033 REXO2Q9Y3B8 237 aaKnown RBP8.54□□□□□ -1.04
MDC1-203ENST00000417033 YIPF1Q9Y548 306 aa8.54□□□□□ -1.04
MDC1-203ENST00000417033 PCDHB5Q9Y5E4 795 aa8.54□□□□□ -1.04
MDC1-203ENST00000417033 IRAK3Q9Y616 596 aa8.54□□□□□ -1.04
MDC1-203ENST00000417033 PTPRDP23468 1912 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 GOLGA6L6A8MZA4 724 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 F8VP50 259 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 NRG2O14511 850 aaPredicted RBP8.53□□□□□ -1.04
MDC1-203ENST00000417033 LINC01565O15544 149 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 ABLIM3O94929 683 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 GJB6O95452 261 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 ERBB2P04626 1255 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 FAM200BP0CF97 657 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 HAPLN1P10915 354 aaPredicted RBP8.53□□□□□ -1.04
MDC1-203ENST00000417033 NPR3P17342 541 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 TNFAIP3P21580 790 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 GPD2P43304 727 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 CLCN4P51793 760 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 KIF11P52732 1056 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 BCAT1P54687 386 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 BPIFB4P59827 614 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 CDK17Q00537 523 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 HYAL1Q12794 435 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 MTMR3Q13615 1198 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 DUSP6Q16828 381 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 CLEC16AQ2KHT3 1053 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 MGAT5BQ3V5L5 792 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 PTPN20Q4JDL3 420 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 HABP4Q5JVS0 413 aaKnown RBP8.53□□□□□ -1.04
MDC1-203ENST00000417033 ZNF697Q5TEC3 545 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 PMF1Q6P1K2 205 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 LILRA6Q6PI73 481 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 TOGARAM2Q6ZUX3 1019 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 PIGZQ86VD9 579 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 GPR65Q8IYL9 337 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 ANKRD52Q8NB46 1076 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 ACRBPQ8NEB7 543 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 GIPC2Q8TF65 315 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 CPA5Q8WXQ8 436 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 NDRG1Q92597 394 aaKnown RBP8.53□□□□□ -1.04
MDC1-203ENST00000417033 MRPL38Q96DV4 380 aaKnown RBP8.53□□□□□ -1.04
MDC1-203ENST00000417033 PIWIL1Q96J94 861 aaKnown RBP8.53□□□□□ -1.04
MDC1-203ENST00000417033 CPXM1Q96SM3 734 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 EMILIN2Q9BXX0 1053 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 LMAN2LQ9H0V9 348 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 CYP4F11Q9HBI6 524 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 ZNHIT6Q9NWK9 470 aaKnown RBP8.53□□□□□ -1.04
MDC1-203ENST00000417033 AFF4Q9UHB7 1163 aaKnown RBP8.53□□□□□ -1.04
MDC1-203ENST00000417033 CHORDC1Q9UHD1 332 aaPredicted RBP8.53□□□□□ -1.04
MDC1-203ENST00000417033 ADAMTS1Q9UHI8 967 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 CDH22Q9UJ99 828 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 FBXW11Q9UKB1 542 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 PYCARDQ9ULZ3 195 aa8.53□□□□□ -1.04
MDC1-203ENST00000417033 PRRC2BQ5JSZ5 2229 aaKnown RBP8.53□□□□□ -1.04
MDC1-203ENST00000417033 TMEM265A0A087WTH1 108 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 SSU72P8A0A1W2PR75 194 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 MED7O43513 233 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 RFPL2O75678 378 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 GLP2RO95838 553 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 GLUD1P00367 558 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 ADH1AP07327 375 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 C8AP07357 584 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 UNGP13051 313 aaPredicted RBP8.52□□□□□ -1.05
MDC1-203ENST00000417033 ATF2P15336 505 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 CDH5P33151 784 aaPredicted RBP8.52□□□□□ -1.05
MDC1-203ENST00000417033 GRIK1P39086 918 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 PGFP49763 221 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 USP46P62068 366 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 BST2Q10589 180 aaKnown RBP8.52□□□□□ -1.05
MDC1-203ENST00000417033 IFRD2Q12894 506 aaPredicted RBP8.52□□□□□ -1.05
MDC1-203ENST00000417033 PTP4A2Q12974 167 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 PDCLQ13371 301 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 MAPRE1Q15691 268 aaKnown RBP8.52□□□□□ -1.05
MDC1-203ENST00000417033 NFE2Q16621 373 aaPredicted RBP8.52□□□□□ -1.05
MDC1-203ENST00000417033 CFAP221Q4G0U5 840 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 CYP4A22Q5TCH4 519 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 CYP26C1Q6V0L0 522 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 C4orf50Q6ZRC1 276 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 MMS22LQ6ZRQ5 1243 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 MICALL1Q8N3F8 863 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 KREMEN2Q8NCW0 462 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 ZNF461Q8TAF7 563 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 SLC7A14Q8TBB6 771 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 SPPL2BQ8TCT7 592 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 CLEC4CQ8WTT0 213 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 SLC35F5Q8WV83 523 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 MYLIPQ8WY64 445 aa8.52□□□□□ -1.05
MDC1-203ENST00000417033 SMARCD1Q96GM5 515 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms