RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 EIF4E1BA6NMX2 242 aaKnown RBP10.04□□□□□ -0.8
LINC01238-201ENST00000416204 GOLGA8CPA6NN73 597 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 TRIM24O15164 1050 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 EPB41L2O43491 1005 aaKnown RBP10.04□□□□□ -0.8
LINC01238-201ENST00000416204 FAM13AO94988 1023 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 KAT7O95251 611 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 FTH1P19P0C7X4 201 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 PLCG1P19174 1290 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 RDXP35241 583 aaKnown RBP10.04□□□□□ -0.8
LINC01238-201ENST00000416204 RPL10AP62906 217 aaKnown RBP10.04□□□□□ -0.8
LINC01238-201ENST00000416204 SMARCB1Q12824 385 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 IFRD2Q12894 506 aaPredicted RBP10.04□□□□□ -0.8
LINC01238-201ENST00000416204 RESTQ13127 1097 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 DHCR24Q15392 516 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 KYAT1Q16773 422 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 DUOXA1Q1HG43 343 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 ZNF423Q2M1K9 1284 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 INTS6LQ5JSJ4 861 aaKnown RBP10.04□□□□□ -0.8
LINC01238-201ENST00000416204 SPATA2LQ8IUW3 424 aaPredicted RBP10.04□□□□□ -0.8
LINC01238-201ENST00000416204 FBXO18Q8NFZ0 1043 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 NOC3LQ8WTT2 800 aaKnown RBP10.04□□□□□ -0.8
LINC01238-201ENST00000416204 CDK5RAP3Q96JB5 506 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 PNKPQ96T60 521 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 RNF38Q9H0F5 515 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 SLC6A17Q9H1V8 727 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 CAPN10Q9HC96 672 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 POLMQ9NP87 494 aaPredicted RBP10.04□□□□□ -0.8
LINC01238-201ENST00000416204 ARHGEF4Q9NR80 690 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 CALCOCO1Q9P1Z2 691 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 CFAP97Q9P2B7 532 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 LARSQ9P2J5 1176 aaKnown RBP10.04□□□□□ -0.8
LINC01238-201ENST00000416204 UXTQ9UBK9 157 aaPredicted RBP10.04□□□□□ -0.8
LINC01238-201ENST00000416204 ARHGAP26Q9UNA1 814 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 CYP8B1Q9UNU6 501 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 AGAP1Q9UPQ3 857 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 CPQQ9Y646 472 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 DENND4CQ5VZ89 1909 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 TNRC6BQ9UPQ9 1833 aaKnown RBP10.03□□□□□ -0.8
LINC01238-201ENST00000416204 PCNX2A6NKB5 2137 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 UPK3BL1B0FP48 263 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 UPK3BL2E5RIL1 263 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 H0Y626 953 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 ARHGAP33O14559 1287 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 TRIM16O95361 564 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 PIGRP01833 764 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 APODP05090 189 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 ITGB3P05106 788 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 KRT18P05783 430 aaKnown RBP10.03□□□□□ -0.8
LINC01238-201ENST00000416204 SERPINF2P08697 491 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 GABRG2P18507 467 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 MAOBP27338 520 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 KIR2DL1P43626 348 aaPredicted RBP10.03□□□□□ -0.8
LINC01238-201ENST00000416204 TRAPPC10P48553 1259 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 MRPS21P82921 87 aaKnown RBP10.03□□□□□ -0.8
LINC01238-201ENST00000416204 ZNF33AQ06730 810 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 NFE2Q16621 373 aaPredicted RBP10.03□□□□□ -0.8
LINC01238-201ENST00000416204 LMBRD2Q68DH5 695 aaPredicted RBP10.03□□□□□ -0.8
LINC01238-201ENST00000416204 RHBDF2Q6PJF5 856 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 SLCO6A1Q86UG4 719 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 SLC41A1Q8IVJ1 513 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 CD302Q8IX05 232 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 TRIML1Q8N9V2 468 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 FSIP1Q8NA03 581 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 CCDC26Q8TAB7 109 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 SPATA18Q8TC71 538 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 SAAL1Q96ER3 474 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 TRMT2BQ96GJ1 504 aaKnown RBP10.03□□□□□ -0.8
LINC01238-201ENST00000416204 MYRFLQ96LU7 910 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 HSPA12BQ96MM6 686 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 PKMYT1Q99640 499 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 HELZ2Q9BYK8 2649 aaKnown RBP10.03□□□□□ -0.8
LINC01238-201ENST00000416204 AGO2Q9UKV8 859 aaKnown RBP10.03□□□□□ -0.8
LINC01238-201ENST00000416204 DERAQ9Y315 318 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 C2CD2Q9Y426 696 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 PCDHB9Q9Y5E1 797 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.03□□□□□ -0.8
LINC01238-201ENST00000416204 STK24Q9Y6E0 443 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 PTPRDP23468 1912 aa10.03□□□□□ -0.8
LINC01238-201ENST00000416204 FAM221BA6H8Z2 402 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 TBC1D3BA6NDS4 549 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 H0YCG3 227 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 AP5Z1O43299 807 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 TRAK2O60296 914 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 HUS1O60921 280 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 KRT19P08727 400 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 PDGFRBP09619 1106 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 ADH5P11766 374 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 BDNFP23560 247 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 LMO2P25791 158 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 GRIK1P39086 918 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 MYL7Q01449 175 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 MCM6Q14566 821 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 PLEKHG6Q3KR16 790 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 TMEM119Q4V9L6 283 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 CCDC157Q569K6 752 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 EOGTQ5NDL2 527 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 CRELD2Q6UXH1 353 aaPredicted RBP10.02□□□□□ -0.81
LINC01238-201ENST00000416204 CCNI2Q6ZMN8 369 aaPredicted RBP10.02□□□□□ -0.81
LINC01238-201ENST00000416204 MIB1Q86YT6 1006 aa10.02□□□□□ -0.81
LINC01238-201ENST00000416204 NAXDQ8IW45 347 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms