RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 MRPS31Q92665 395 aaKnown RBP11.03□□□□□ -0.64
COL12A1-203ENST00000416123 MRPL1Q9BYD6 325 aaKnown RBP11.03□□□□□ -0.64
COL12A1-203ENST00000416123 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.03□□□□□ -0.64
COL12A1-203ENST00000416123 RNF112Q9ULX5 631 aa11.03□□□□□ -0.64
COL12A1-203ENST00000416123 RUVBL2Q9Y230 463 aaKnown RBP11.03□□□□□ -0.64
COL12A1-203ENST00000416123 PCDHB12Q9Y5F1 795 aa11.03□□□□□ -0.64
COL12A1-203ENST00000416123 C2orf81A6NN90 581 aa11.03□□□□□ -0.64
COL12A1-203ENST00000416123 RFX3P48380 749 aa11.03□□□□□ -0.64
COL12A1-203ENST00000416123 EPHB3P54753 998 aa11.03□□□□□ -0.64
COL12A1-203ENST00000416123 SLC29A2Q14542 456 aa11.03□□□□□ -0.64
COL12A1-203ENST00000416123 MFSD10Q14728 455 aa11.03□□□□□ -0.64
COL12A1-203ENST00000416123 TERF2Q15554 542 aa11.03□□□□□ -0.64
COL12A1-203ENST00000416123 TMC7Q7Z402 723 aa11.03□□□□□ -0.64
COL12A1-203ENST00000416123 ZC3H15Q8WU90 426 aaKnown RBP11.03□□□□□ -0.64
COL12A1-203ENST00000416123 MTG1Q9BT17 334 aaPredicted RBP11.03□□□□□ -0.64
COL12A1-203ENST00000416123 RAG1P15918 1043 aa11.03□□□□□ -0.64
COL12A1-203ENST00000416123 PTPAQ15257 358 aa11.03□□□□□ -0.64
COL12A1-203ENST00000416123 ADAM32Q8TC27 787 aa11.03□□□□□ -0.64
COL12A1-203ENST00000416123 TMEM176AQ96HP8 235 aa11.03□□□□□ -0.64
COL12A1-203ENST00000416123 RAD18Q9NS91 495 aa11.03□□□□□ -0.64
COL12A1-203ENST00000416123 CCDC130P13994 396 aa11.03□□□□□ -0.64
COL12A1-203ENST00000416123 TMEM121Q9BTD3 319 aa11.03□□□□□ -0.64
COL12A1-203ENST00000416123 NT5MQ9NPB1 228 aa11.03□□□□□ -0.64
COL12A1-203ENST00000416123 MST1RQ04912 1400 aa11.02□□□□□ -0.64
COL12A1-203ENST00000416123 GTPBP10A4D1E9 387 aaKnown RBP11.02□□□□□ -0.64
COL12A1-203ENST00000416123 GLRBP48167 497 aa11.02□□□□□ -0.64
COL12A1-203ENST00000416123 VGLL4Q14135 290 aa11.02□□□□□ -0.64
COL12A1-203ENST00000416123 ZNF720Q7Z2F6 126 aa11.02□□□□□ -0.64
COL12A1-203ENST00000416123 ARMC2Q8NEN0 867 aa11.02□□□□□ -0.64
COL12A1-203ENST00000416123 FAM162AQ96A26 154 aa11.02□□□□□ -0.64
COL12A1-203ENST00000416123 SPATA16Q9BXB7 569 aa11.02□□□□□ -0.64
COL12A1-203ENST00000416123 UNKQ9C0B0 810 aaKnown RBP11.02□□□□□ -0.64
COL12A1-203ENST00000416123 WWP1Q9H0M0 922 aa11.02□□□□□ -0.64
COL12A1-203ENST00000416123 PIH1D1Q9NWS0 290 aaKnown RBP11.02□□□□□ -0.64
COL12A1-203ENST00000416123 MUTP22033 750 aa11.02□□□□□ -0.64
COL12A1-203ENST00000416123 BCAT1P54687 386 aa11.02□□□□□ -0.64
COL12A1-203ENST00000416123 NME5P56597 212 aa11.02□□□□□ -0.64
COL12A1-203ENST00000416123 ADIGQ0VDE8 80 aa11.02□□□□□ -0.64
COL12A1-203ENST00000416123 GALNTL6Q49A17 601 aa11.02□□□□□ -0.64
COL12A1-203ENST00000416123 EARS2Q5JPH6 523 aaKnown RBP11.02□□□□□ -0.64
COL12A1-203ENST00000416123 TAS1R2Q8TE23 839 aa11.02□□□□□ -0.64
COL12A1-203ENST00000416123 THTPAQ9BU02 230 aa11.02□□□□□ -0.64
COL12A1-203ENST00000416123 NDE1Q9NXR1 346 aa11.02□□□□□ -0.64
COL12A1-203ENST00000416123 FAM86B1E9PN63 330 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 CBX4O00257 560 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 FAM86B2P0C5J1 330 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 CDH8P55286 799 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 POU4F1Q01851 419 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 WASHC5Q12768 1159 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 MAPRE2Q15555 327 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 FAM171A1Q5VUB5 890 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 METTL7BQ6UX53 244 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 PRPF39Q86UA1 669 aaKnown RBP11.02□□□□□ -0.65
COL12A1-203ENST00000416123 LONP2Q86WA8 852 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 USP38Q8NB14 1042 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 KRT35Q92764 455 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 OSGEPQ9NPF4 335 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 SLIT1O75093 1534 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 AKAP10O43572 662 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 CAPN15O75808 1086 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 ERVK-24P63145 666 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 LAMB3Q13751 1172 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 SEC23AQ15436 765 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 CYTH1Q15438 398 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 PKN1Q16512 942 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 UGP2Q16851 508 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 DNERQ8NFT8 737 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 MDM1Q8TC05 714 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 CYGBQ8WWM9 190 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 ANKS1AQ92625 1134 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 SMAD5Q99717 465 aaKnown RBP11.02□□□□□ -0.65
COL12A1-203ENST00000416123 XPNPEP3Q9NQH7 507 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 WWOXQ9NZC7 414 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 TRMT6Q9UJA5 497 aaKnown RBP11.02□□□□□ -0.65
COL12A1-203ENST00000416123 SRP72O76094 671 aaKnown RBP11.02□□□□□ -0.65
COL12A1-203ENST00000416123 FKBP9O95302 570 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 MDH1P40925 334 aaKnown RBP11.02□□□□□ -0.65
COL12A1-203ENST00000416123 PMS1P54277 932 aaKnown RBP11.02□□□□□ -0.65
COL12A1-203ENST00000416123 FKBP9P1Q75LS8 142 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 C6orf203Q9P0P8 240 aaPredicted RBP11.02□□□□□ -0.65
COL12A1-203ENST00000416123 VPS28Q9UK41 221 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 CDV3Q9UKY7 258 aaKnown RBP11.02□□□□□ -0.65
COL12A1-203ENST00000416123 A8MX80 341 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 P4HA2O15460 535 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 ERVK-9P63128 1117 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 CLEC17AQ6ZS10 378 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 WNK4Q96J92 1243 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 CGRRF1Q99675 332 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 HEATR9A2RTY3 570 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 VDRP11473 427 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 TKTL1P51854 596 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 DDX39BQ13838 428 aaKnown RBP11.02□□□□□ -0.65
COL12A1-203ENST00000416123 SEPT8Q92599 483 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 ERP44Q9BS26 406 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 CYP4F12Q9HCS2 524 aa11.02□□□□□ -0.65
COL12A1-203ENST00000416123 ACADMP11310 421 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 PTK6Q13882 451 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 FAM83AQ86UY5 434 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 ZSWIM2Q8NEG5 633 aa11.01□□□□□ -0.65
COL12A1-203ENST00000416123 CALML6Q8TD86 181 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms