RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 DYDC2Q96IM9 177 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 RAX2Q96IS3 184 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 AMNQ9BXJ7 453 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 IRX2Q9BZI1 471 aaPredicted RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 INCENPQ9NQS7 918 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 RBM12Q9NTZ6 932 aaKnown RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 ZDHHC7Q9NXF8 308 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 USP36Q9P275 1121 aaKnown RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 DENND2AQ9ULE3 1009 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 RBM8AQ9Y5S9 174 aaKnown RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 TCRBV5S2A0A599 114 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 GTPBP10A4D1E9 387 aaKnown RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 ZNF785A8K8V0 405 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 A8MV72 311 aaPredicted RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 H7BY64 318 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 P4HA2O15460 535 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 PPP6R2O75170 966 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 NR2F1P10589 423 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 HOXB4P17483 251 aaPredicted RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 DDCP20711 480 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 MALP21145 153 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 WASP42768 502 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 FLT3LGP49771 235 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 KCNQ1P51787 676 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 SNX16P57768 344 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 CD83Q01151 205 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 SCARB2Q14108 478 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 MBTPS1Q14703 1052 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 SKIDA1Q1XH10 827 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 CST9Q5W186 159 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 LRRTM4Q86VH4 590 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 FTSJ3Q8IY81 847 aaKnown RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 RTKN2Q8IZC4 609 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 DTWD1Q8N5C7 304 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 GLIS1Q8NBF1 620 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 CCDC150Q8NCX0 1101 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 C3orf20Q8ND61 904 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 FLCNQ8NFG4 579 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 BRIX1Q8TDN6 353 aaKnown RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 ZNF384Q8TF68 577 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 GRAMD1AQ96CP6 724 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 TMEM41AQ96HV5 264 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 YME1L1Q96TA2 773 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 ABCG4Q9H172 646 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 GSX1Q9H4S2 264 aaPredicted RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 DECR2Q9NUI1 292 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 PIH1D1Q9NWS0 290 aaKnown RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 ING3Q9NXR8 418 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 ZNF212Q9UDV6 495 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 ODF2LQ9ULJ1 636 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 C19orf53Q9UNZ5 99 aaPredicted RBP2.86□□□□□ -1.95
MCF2-204ENST00000414978 A0A1B0GUL6 1792 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 CARMIL3Q8ND23 1372 aa2.86□□□□□ -1.95
MCF2-204ENST00000414978 GOLGA6L22H0YM25 854 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 H3BM21 787 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 UBE2CO00762 179 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 CYP27B1O15528 508 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 DNPH1O43598 174 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 CLASP2O75122 1294 aaKnown RBP2.85□□□□□ -1.95
MCF2-204ENST00000414978 GPR32O75388 356 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 MAFO75444 373 aaPredicted RBP2.85□□□□□ -1.95
MCF2-204ENST00000414978 SOAT2O75908 522 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 BBOX1O75936 387 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 UNC5CO95185 931 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 C22orf31O95567 290 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 TUBB4AP04350 444 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 PFKMP08237 780 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 ALAS1P13196 640 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 GMPRP36959 345 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 ALDH1A3P47895 512 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 BCAT1P54687 386 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 FKBP1BP68106 108 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 NKX6-1P78426 367 aaPredicted RBP2.85□□□□□ -1.95
MCF2-204ENST00000414978 GALNT2Q10471 571 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 BECN1Q14457 450 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 ATP2B3Q16720 1220 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 WDR72Q3MJ13 1102 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 DCAF12L1Q5VU92 463 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 KIAA1841Q6NSI8 718 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 MOGAT3Q86VF5 341 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 VSIG10LQ86VR7 867 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 GALNT4Q8N4A0 578 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 CDYL2Q8N8U2 506 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 SLC17A8Q8NDX2 589 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 Q8NFD4 153 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 MAML1Q92585 1016 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 RBM18Q96H35 190 aaKnown RBP2.85□□□□□ -1.95
MCF2-204ENST00000414978 RBM17Q96I25 401 aaKnown RBP2.85□□□□□ -1.95
MCF2-204ENST00000414978 MAP6Q96JE9 813 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 SNX22Q96L94 193 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 DDX23Q9BUQ8 820 aaKnown RBP2.85□□□□□ -1.95
MCF2-204ENST00000414978 STK33Q9BYT3 514 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.85□□□□□ -1.95
MCF2-204ENST00000414978 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.85□□□□□ -1.95
MCF2-204ENST00000414978 ASH2LQ9UBL3 628 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 NARFQ9UHQ1 456 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 FEM1BQ9UK73 627 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 KIF7Q2M1P5 1343 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 ZNF541Q9H0D2 1346 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 WIPF3A6NGB9 483 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms