RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ZHX3Q9H4I2 956 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 ALG13Q9NP73 1137 aaKnown RBP5.35□□□□□ -1.55
VPS41-205ENST00000414632 CHST7Q9NS84 486 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 C1orf112Q9NSG2 853 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 BLOC1S4Q9NUP1 217 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 TMEM161AQ9NX61 479 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 STXBP5LQ9Y2K9 1186 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 TRAF6Q9Y4K3 522 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 HES2Q9Y543 173 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 PCDHB2Q9Y5E7 798 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 PCDHA9Q9Y5H5 950 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 SRPRBQ9Y5M8 271 aaKnown RBP5.35□□□□□ -1.55
VPS41-205ENST00000414632 PLXNA3P51805 1871 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 MYO7AQ13402 2215 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 A0A0U1RQF3 1178 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 FAM95CA0A1B0GW59 222 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 NT5C1B-RDH14C9J2C7 533 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 H0Y8X5 98 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 GRM6O15303 877 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 SLC16A4O15374 487 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 SIGLEC6O43699 453 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 B4GALT3O60512 393 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 PRAMEF1O95521 474 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 POMCP01189 267 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 MUTP22033 750 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 AKAP5P24588 427 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 MAP4P27816 1152 aaKnown RBP5.34□□□□□ -1.55
VPS41-205ENST00000414632 NOS3P29474 1203 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 HOXA11P31270 313 aaPredicted RBP5.34□□□□□ -1.55
VPS41-205ENST00000414632 IGFALSP35858 605 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 NAMPTP43490 491 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 NPTX2P47972 431 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 ME1P48163 572 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 FAM189BP81408 668 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 INSM1Q01101 510 aaPredicted RBP5.34□□□□□ -1.55
VPS41-205ENST00000414632 STAT4Q14765 748 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 SEPT7Q16181 437 aaKnown RBP5.34□□□□□ -1.55
VPS41-205ENST00000414632 HYIQ5T013 277 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 RRAGBQ5VZM2 374 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 CDCA2Q69YH5 1023 aaPredicted RBP5.34□□□□□ -1.55
VPS41-205ENST00000414632 NOTUMQ6P988 496 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 KCNT2Q6UVM3 1135 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 LRRC55Q6ZSA7 311 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 C1orf186Q6ZWK4 172 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 CMTR2Q8IYT2 770 aaKnown RBP5.34□□□□□ -1.55
VPS41-205ENST00000414632 ABI1Q8IZP0 508 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 LINC00301Q8NCQ3 95 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 KREMEN2Q8NCW0 462 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 LARP4BQ92615 738 aaKnown RBP5.34□□□□□ -1.55
VPS41-205ENST00000414632 KIFAP3Q92845 792 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 CASD1Q96PB1 797 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 REEP2Q9BRK0 252 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 TRIM6Q9C030 488 aaPredicted RBP5.34□□□□□ -1.55
VPS41-205ENST00000414632 CXCL16Q9H2A7 254 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 NXF3Q9H4D5 531 aaKnown RBP5.34□□□□□ -1.55
VPS41-205ENST00000414632 PDZD7Q9H5P4 517 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 CWH43Q9H720 699 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 KMT5AQ9NQR1 393 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 C1GALT1Q9NS00 363 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 DACT1Q9NYF0 836 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 NOP53Q9NZM5 478 aaKnown RBP5.34□□□□□ -1.55
VPS41-205ENST00000414632 CCDC39Q9UFE4 941 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 KCNH3Q9ULD8 1083 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 IPPQ9Y573 584 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 MTCH2Q9Y6C9 303 aa5.34□□□□□ -1.55
VPS41-205ENST00000414632 PHLPP2Q6ZVD8 1323 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 CNTNAP2Q9UHC6 1331 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 K7ENM7 598 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 AQP7O14520 342 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 BRINP1O60477 761 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 CUTAO60888 179 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 ZC3H11AO75152 810 aaKnown RBP eCLIP5.33□□□□□ -1.56
VPS41-205ENST00000414632 LEFTY1O75610 366 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 YEATS4O95619 227 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 CBX7O95931 251 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 ITGB1P05556 798 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 DNAJB1P25685 340 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 CASP1P29466 404 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 NMT1P30419 496 aaKnown RBP5.33□□□□□ -1.56
VPS41-205ENST00000414632 CA8P35219 290 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 BMPR1AP36894 532 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 MLH1P40692 756 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 STAT6P42226 847 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 RAB27AP51159 221 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 SCNN1GP51170 649 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 EPHB1P54762 984 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 OSTNP61366 133 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 POU4F1Q01851 419 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 GUCY1A3Q02108 690 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 NRG1Q02297 640 aaPredicted RBP5.33□□□□□ -1.56
VPS41-205ENST00000414632 NCBP1Q09161 790 aaKnown RBP5.33□□□□□ -1.56
VPS41-205ENST00000414632 DMP1Q13316 513 aaPredicted RBP5.33□□□□□ -1.56
VPS41-205ENST00000414632 PRPF4BQ13523 1007 aaKnown RBP5.33□□□□□ -1.56
VPS41-205ENST00000414632 GIT2Q14161 759 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 PPP2R5AQ15172 486 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 MAPK6Q16659 721 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 NT5DC1Q5TFE4 455 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 RNF219Q5W0B1 726 aaPredicted RBP5.33□□□□□ -1.56
VPS41-205ENST00000414632 CWF19L1Q69YN2 538 aaKnown RBP5.33□□□□□ -1.56
VPS41-205ENST00000414632 SLC27A1Q6PCB7 646 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms