RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 UBXN11Q5T124 520 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 PDPK2PQ6A1A2 396 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 TWF2Q6IBS0 349 aaKnown RBP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 TMEM132EQ6IEE7 984 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 FAM173BQ6P4H8 233 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 IYDQ6PHW0 289 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 SASS6Q6UVJ0 657 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 HHIPL2Q6UWX4 724 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 ARHGAP36Q6ZRI8 547 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 CTAGE6Q86UF2 777 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 LUZP1Q86V48 1076 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 COMTD1Q86VU5 262 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 HEATR4Q86WZ0 1026 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 CEP97Q8IW35 865 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 CTAGE4Q8IX94 777 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 C12orf56Q8IXR9 622 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 PALM2Q8IXS6 379 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 AHI1Q8N157 1196 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 ANKS4BQ8N8V4 417 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 ZNF565Q8N9K5 539 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 SMC1BQ8NDV3 1235 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 SHCBP1Q8NEM2 672 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 ETNPPLQ8TBG4 499 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 ADAMTS15Q8TE58 950 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 ZNF296Q8WUU4 475 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 TRAPPC12Q8WVT3 735 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 LRRC59Q96AG4 307 aaKnown RBP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 NSUN4Q96CB9 384 aaKnown RBP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 SGF29Q96ES7 293 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 FUBP3Q96I24 572 aaKnown RBP eCLIP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 C7orf34Q96L11 122 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 TEPSINQ96N21 525 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 CLUHP3Q96NS8 147 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 DACH2Q96NX9 599 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 LENG8Q96PV6 779 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 TAAR9Q96RI9 348 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 BCL7BQ9BQE9 202 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 SLC6A17Q9H1V8 727 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 DCTPP1Q9H773 170 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 NMRK2Q9NPI5 230 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 CCDC177Q9NQR7 707 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 ANO10Q9NW15 660 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 GDAP2Q9NXN4 497 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 GPRC5BQ9NZH0 403 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 COX16Q9P0S2 106 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 ACTR3BQ9P1U1 418 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 UBA2Q9UBT2 640 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 TUBGCP4Q9UGJ1 667 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 SRP68Q9UHB9 627 aaKnown RBP3.86□□□□□ -1.79
SF3B1-203ENST00000414174 DUSP13Q9UII6 198 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 DSEQ9UL01 958 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 CFL2Q9Y281 166 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 ZNF281Q9Y2X9 895 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 ROCK1Q13464 1354 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 TNIKQ9UKE5 1360 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 NCOA3Q9Y6Q9 1424 aa3.86□□□□□ -1.79
SF3B1-203ENST00000414174 UQCRHLA0A096LP55 91 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 OR6C74A6NCV1 312 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 GOLGA6L10A6NI86 522 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 SLC22A31A6NKX4 558 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 OR5K4A6NMS3 321 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 NOTOA8MTQ0 251 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 STMND1H3BQB6 276 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 HAT1O14929 419 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 AKAP8O43823 692 aaKnown RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 ZEB2O60315 1214 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 PQBP1O60828 265 aaKnown RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 TACC1O75410 805 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 CSTBP04080 98 aaKnown RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 POLBP06746 335 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 UQCRHP07919 91 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 ABCB1P08183 1280 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 PRKAR1AP10644 381 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 XRCC6P12956 609 aaKnown RBP eCLIP3.85□□□□□ -1.796e-10■■■■■ 46
SF3B1-203ENST00000414174 ALOX15P16050 662 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 HSPA6P17066 643 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 PAMP19021 973 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 SDSP20132 328 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 FGFR4P22455 802 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 PRKACBP22694 351 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 ADSSP30520 456 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 KRT2P35908 639 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 TRIM23P36406 574 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 LONP1P36776 959 aaKnown RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 CCNFP41002 786 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 ACAA2P42765 397 aaKnown RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 TUBP50607 506 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 PLCD1P51178 756 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 AFF3P51826 1226 aaKnown RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 PMS2P54278 862 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 CACNB3P54284 484 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 ALDH18A1P54886 795 aaKnown RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 NR1H2P55055 460 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 SLC8A3P57103 927 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 ACTR1AP61163 376 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 NOP14P78316 857 aaKnown RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 OLR1P78380 273 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 KRT85P78386 507 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 TEKQ02763 1124 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms