RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 GRM2Q14416 872 aa18.02■□□□□ 0.48
SCAMP4-204ENST00000414057 POTEHQ6S545 545 aa18.02■□□□□ 0.48
SCAMP4-204ENST00000414057 MFSD6LQ8IWD5 586 aa18.02■□□□□ 0.48
SCAMP4-204ENST00000414057 C1orf127Q8N9H9 656 aa18.02■□□□□ 0.48
SCAMP4-204ENST00000414057 ZSWIM3Q96MP5 696 aa18.02■□□□□ 0.48
SCAMP4-204ENST00000414057 LSM14BQ9BX40 385 aaKnown RBP18.02■□□□□ 0.48
SCAMP4-204ENST00000414057 ZNHIT6Q9NWK9 470 aaKnown RBP18.02■□□□□ 0.48
SCAMP4-204ENST00000414057 MYO6Q9UM54 1294 aa18.02■□□□□ 0.48
SCAMP4-204ENST00000414057 TNNC2P02585 160 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 PON1P27169 355 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 GABRR2P28476 465 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 CDC25CP30307 473 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 GDI1P31150 447 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 KLK7P49862 253 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 AP3M2P53677 418 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 KRT39Q6A163 491 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 VITQ6UXI7 678 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 CACNA2D4Q7Z3S7 1137 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 TMTC1Q8IUR5 882 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 TMEM139Q8IV31 216 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 FMNL3Q8IVF7 1028 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 ZSWIM2Q8NEG5 633 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 KIAA1524Q8TCG1 905 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 FNBP1Q96RU3 617 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 ACBD6Q9BR61 282 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 TMEM8AQ9HCN3 771 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 PDE11AQ9HCR9 933 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 ZNF334Q9HCZ1 680 aaPredicted RBP18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 HEBP1Q9NRV9 189 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 PCDHB5Q9Y5E4 795 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 PRR23AA6NEV1 266 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 DPYSL4O14531 572 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 HNRNPH3P31942 346 aaKnown RBP18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 VIPR2P41587 438 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 LHX1P48742 406 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 MXI1P50539 228 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 DUOXA2Q1HG44 320 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 C1orf220Q5T0J3 134 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 C1orf228Q6PIY5 440 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 DPH6Q7L8W6 267 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 TTC9BQ8N6N2 239 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 TOP6BLQ8N6T0 577 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 SYN2Q92777 582 aaPredicted RBP18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 MSANTD3Q96H12 275 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 CRACR2AQ9BSW2 395 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 MTMR12Q9C0I1 747 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 GDAP2Q9NXN4 497 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 ABI2Q9NYB9 513 aaPredicted RBP18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 COQ4Q9Y3A0 265 aa18.01■□□□□ 0.47
SCAMP4-204ENST00000414057 LRRIQ3A6PVS8 624 aaPredicted RBP18■□□□□ 0.47
SCAMP4-204ENST00000414057 HEPACAM2A8MVW5 462 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 LAMTOR5O43504 91 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 ZNF500O60304 480 aaPredicted RBP18■□□□□ 0.47
SCAMP4-204ENST00000414057 SOAT2O75908 522 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 NOL4O94818 638 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 HAPLN1P10915 354 aaPredicted RBP18■□□□□ 0.47
SCAMP4-204ENST00000414057 GLULP15104 373 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 MLLT6P55198 1093 aaPredicted RBP18■□□□□ 0.47
SCAMP4-204ENST00000414057 WNT7BP56706 349 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 DLG4P78352 724 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 CDK17Q00537 523 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 MEA1Q16626 185 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 CBWD6Q4V339 395 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 CBWD3Q5JTY5 395 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 CBWD5Q5RIA9 395 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 KLHDC7AQ5VTJ3 777 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 TRIM65Q6PJ69 517 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 ASCL5Q7RTU5 278 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 PDCL2Q8N4E4 241 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 PLEKHO2Q8TD55 490 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 CSGALNACT1Q8TDX6 532 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 GANQ9H2C0 597 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 KCND1Q9NSA2 647 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 SPATA6Q9NWH7 488 aaPredicted RBP18■□□□□ 0.47
SCAMP4-204ENST00000414057 DDX43Q9NXZ2 648 aaKnown RBP18■□□□□ 0.47
SCAMP4-204ENST00000414057 OBP2AQ9NY56 170 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 FBXO4Q9UKT5 387 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 SNX9Q9Y5X1 595 aa18■□□□□ 0.47
SCAMP4-204ENST00000414057 CHADO15335 359 aa17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 CCP110O43303 1012 aa17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 CD72P21854 359 aa17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 TARSP26639 723 aaKnown RBP17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 PCSK1P29120 753 aa17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 RPS9P46781 194 aaKnown RBP17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 PPP3CAQ08209 521 aa17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 GOLGA8FQ08AF8 430 aa17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 GOLGA8DPQ0D2H9 430 aa17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 GPR158Q5T848 1215 aa17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 GAREM2Q75VX8 874 aa17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 LRRTM3Q86VH5 581 aa17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 WDR49Q8IV35 697 aa17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 ARID3BQ8IVW6 561 aaPredicted RBP17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 EHBP1Q8NDI1 1231 aa17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 CLDN23Q96B33 292 aa17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 CCDC127Q96BQ5 260 aa17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 CGRRF1Q99675 332 aa17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 LPIN3Q9BQK8 851 aa17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 ABCB6Q9NP58 842 aa17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 PYCARDQ9ULZ3 195 aa17.99■□□□□ 0.47
SCAMP4-204ENST00000414057 RNF225M0QZC1 329 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms