RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	MTHFR	P42898	656 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	GPR15	P49685	360 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	CACNA2D1	P54289	1103 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	MAP3K7CL	P57077	242 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	BST2	Q10589	180 aa	Known RBP	13.92	□□□□□ -0.18
SF1-206	ENST00000413725	SMAD4	Q13485	552 aa	Known RBP	13.92	□□□□□ -0.18
SF1-206	ENST00000413725	MEA1	Q16626	185 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	AAK1	Q2M2I8	961 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	LEXM	Q3ZCV2	418 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	ATAT1	Q5SQI0	421 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	SFMBT2	Q5VUG0	894 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	CLEC20A	Q6ZU45	233 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	LEMD2	Q8NC56	503 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	GIPC2	Q8TF65	315 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	CPLX3	Q8WVH0	158 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	BAP1	Q92560	729 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	PSMG2	Q969U7	264 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	ZNF707	Q96C28	371 aa	Predicted RBP	13.92	□□□□□ -0.18
SF1-206	ENST00000413725	NECTIN4	Q96NY8	510 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	S1PR5	Q9H228	398 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	CSNK1G1	Q9HCP0	422 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	PNPLA8	Q9NP80	782 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	ACP6	Q9NPH0	428 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	ASAH2	Q9NR71	780 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	THEG	Q9P2T0	379 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	CAPN11	Q9UMQ6	739 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	LUC7L2	Q9Y383	392 aa	Known RBP	13.92	□□□□□ -0.18
SF1-206	ENST00000413725	CEP83	Q9Y592	693 aa		13.92	□□□□□ -0.18
SF1-206	ENST00000413725	GOLGA6L3	A6NEY3	463 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	LRRC53	A6NM62	1247 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	SLC38A8	A6NNN8	435 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	GYPC	P04921	128 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	CYP11B1	P15538	503 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	ZBED6	P86452	979 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	ARID5A	Q03989	594 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	ASIC2	Q16515	512 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	PUS10	Q3MIT2	529 aa	Known RBP	13.91	□□□□□ -0.18
SF1-206	ENST00000413725	SDHAF4	Q5VUM1	108 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	DENND5B	Q6ZUT9	1274 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	TMC6	Q7Z403	805 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.91	□□□□□ -0.18
SF1-206	ENST00000413725	TTC30A	Q86WT1	665 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	ZNF677	Q86XU0	584 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	NUP93	Q8N1F7	819 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	GPR152	Q8TDT2	470 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	EPS8L1	Q8TE68	723 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	KCNK16	Q96T55	309 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	SMO	Q99835	787 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	ZSWIM1	Q9BR11	485 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	CORO1B	Q9BR76	489 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	PDCL3	Q9H2J4	239 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	TMEM30A	Q9NV96	361 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	UXT	Q9UBK9	157 aa	Predicted RBP	13.91	□□□□□ -0.18
SF1-206	ENST00000413725	PCDHGC3	Q9UN70	934 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	FAM50B	Q9Y247	325 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	C5orf42	Q9H799	3197 aa		13.91	□□□□□ -0.18
SF1-206	ENST00000413725	XPO1	O14980	1071 aa	Known RBP	13.9	□□□□□ -0.18
SF1-206	ENST00000413725	BEST1	O76090	585 aa		13.9	□□□□□ -0.18
SF1-206	ENST00000413725	RTN3	O95197	1032 aa	Predicted RBP	13.9	□□□□□ -0.18
SF1-206	ENST00000413725	FGF19	O95750	216 aa		13.9	□□□□□ -0.18
SF1-206	ENST00000413725	SSTR3	P32745	418 aa	Predicted RBP	13.9	□□□□□ -0.18
SF1-206	ENST00000413725	PDE4C	Q08493	712 aa		13.9	□□□□□ -0.18
SF1-206	ENST00000413725	PABPC1L	Q4VXU2	614 aa	Known RBP	13.9	□□□□□ -0.18
SF1-206	ENST00000413725	CYP4A22	Q5TCH4	519 aa		13.9	□□□□□ -0.18
SF1-206	ENST00000413725	PDZD4	Q76G19	769 aa	Predicted RBP	13.9	□□□□□ -0.18
SF1-206	ENST00000413725	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.9	□□□□□ -0.18
SF1-206	ENST00000413725	ZMIZ2	Q8NF64	920 aa		13.9	□□□□□ -0.18
SF1-206	ENST00000413725	UBA3	Q8TBC4	463 aa		13.9	□□□□□ -0.18
SF1-206	ENST00000413725	SECISBP2L	Q93073	1101 aa	Known RBP	13.9	□□□□□ -0.18
SF1-206	ENST00000413725	GCNA	Q96QF7	691 aa		13.9	□□□□□ -0.18
SF1-206	ENST00000413725	UBXN6	Q9BZV1	441 aa		13.9	□□□□□ -0.18
SF1-206	ENST00000413725	COMMD8	Q9NX08	183 aa		13.9	□□□□□ -0.18
SF1-206	ENST00000413725	DNMT3B	Q9UBC3	853 aa	Known RBP	13.9	□□□□□ -0.18
SF1-206	ENST00000413725	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.9	□□□□□ -0.18
SF1-206	ENST00000413725	USP15	Q9Y4E8	981 aa	Predicted RBP	13.9	□□□□□ -0.18
SF1-206	ENST00000413725	CLUH	O75153	1309 aa		13.9	□□□□□ -0.19
SF1-206	ENST00000413725	ZNF197	O14709	1029 aa		13.89	□□□□□ -0.19
SF1-206	ENST00000413725	MBTPS2	O43462	519 aa		13.89	□□□□□ -0.19
SF1-206	ENST00000413725	RHO	P08100	348 aa		13.89	□□□□□ -0.19
SF1-206	ENST00000413725	CASP14	P31944	242 aa		13.89	□□□□□ -0.19
SF1-206	ENST00000413725	PLA2G4A	P47712	749 aa		13.89	□□□□□ -0.19
SF1-206	ENST00000413725	SLC5A3	P53794	718 aa		13.89	□□□□□ -0.19
SF1-206	ENST00000413725	CBX2	Q14781	532 aa	Predicted RBP	13.89	□□□□□ -0.19
SF1-206	ENST00000413725	PKDCC	Q504Y2	493 aa		13.89	□□□□□ -0.19
SF1-206	ENST00000413725	TAF3	Q5VWG9	929 aa		13.89	□□□□□ -0.19
SF1-206	ENST00000413725	NOP9	Q86U38	636 aa	Known RBP	13.89	□□□□□ -0.19
SF1-206	ENST00000413725	PIGZ	Q86VD9	579 aa		13.89	□□□□□ -0.19
SF1-206	ENST00000413725	GPIHBP1	Q8IV16	184 aa		13.89	□□□□□ -0.19
SF1-206	ENST00000413725	STKLD1	Q8NE28	680 aa		13.89	□□□□□ -0.19
SF1-206	ENST00000413725	SUSD6	Q92537	303 aa		13.89	□□□□□ -0.19
SF1-206	ENST00000413725	SYN2	Q92777	582 aa	Predicted RBP	13.89	□□□□□ -0.19
SF1-206	ENST00000413725	TRMT2B	Q96GJ1	504 aa	Known RBP	13.89	□□□□□ -0.19
SF1-206	ENST00000413725	NOX5	Q96PH1	765 aa		13.89	□□□□□ -0.19
SF1-206	ENST00000413725	LHX5	Q9H2C1	402 aa		13.89	□□□□□ -0.19
SF1-206	ENST00000413725	FBXO44	Q9H4M3	255 aa		13.89	□□□□□ -0.19
SF1-206	ENST00000413725	GRPEL1	Q9HAV7	217 aa		13.89	□□□□□ -0.19
SF1-206	ENST00000413725	WDR6	Q9NNW5	1121 aa	Known RBP	13.89	□□□□□ -0.19
SF1-206	ENST00000413725	AVEN	Q9NQS1	362 aa	Predicted RBP	13.89	□□□□□ -0.19
SF1-206	ENST00000413725	PRDM6	Q9NQX0	595 aa		13.89	□□□□□ -0.19
SF1-206	ENST00000413725	HCFC1R1	Q9NWW0	138 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms