RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 SCAMP5Q8TAC9 235 aa5.52□□□□□ -1.53
HMGB3P31-201ENST00000413333 TMEM125Q96AQ2 219 aa5.52□□□□□ -1.53
HMGB3P31-201ENST00000413333 ZBTB45Q96K62 511 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P31-201ENST00000413333 DCLRE1CQ96SD1 692 aaKnown RBP5.52□□□□□ -1.53
HMGB3P31-201ENST00000413333 RTKNQ9BST9 563 aa5.52□□□□□ -1.53
HMGB3P31-201ENST00000413333 KRTAP9-2Q9BYQ4 174 aa5.52□□□□□ -1.53
HMGB3P31-201ENST00000413333 ZHX3Q9H4I2 956 aa5.52□□□□□ -1.53
HMGB3P31-201ENST00000413333 TAF1DQ9H5J8 278 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P31-201ENST00000413333 SEPSECSQ9HD40 501 aaKnown RBP5.52□□□□□ -1.53
HMGB3P31-201ENST00000413333 SAYSD1Q9NPB0 183 aa5.52□□□□□ -1.53
HMGB3P31-201ENST00000413333 RIC8AQ9NPQ8 531 aa5.52□□□□□ -1.53
HMGB3P31-201ENST00000413333 HELLSQ9NRZ9 838 aa5.52□□□□□ -1.53
HMGB3P31-201ENST00000413333 IFT80Q9P2H3 777 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P31-201ENST00000413333 SERTAD3Q9UJW9 196 aa5.52□□□□□ -1.53
HMGB3P31-201ENST00000413333 CA14Q9ULX7 337 aa5.52□□□□□ -1.53
HMGB3P31-201ENST00000413333 SORCS3Q9UPU3 1222 aa5.52□□□□□ -1.53
HMGB3P31-201ENST00000413333 CRYL1Q9Y2S2 319 aa5.52□□□□□ -1.53
HMGB3P31-201ENST00000413333 NEU2Q9Y3R4 380 aa5.52□□□□□ -1.53
HMGB3P31-201ENST00000413333 DIRC3C9JPN6 131 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 E7ENX8 843 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 J3KTA2 159 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 EYA2O00167 538 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 PCDH17O14917 1159 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 CD3EAPO15446 510 aaKnown RBP5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 GPR42O15529 346 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 ZSCAN9O15535 394 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 SCAF4O95104 1147 aaKnown RBP5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 PLATP00750 562 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 VIPP01282 170 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 HLA-DOAP06340 250 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 ELANEP08246 267 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 ARP10275 920 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 TNFAIP3P21580 790 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 COMTP21964 271 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 ADORA2AP29274 412 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 CD6P30203 668 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 PRKAR1BP31321 381 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 HIBADHP31937 336 aaKnown RBP5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 NPTX2P47972 431 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 SCNN1GP51170 649 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 PGDP52209 483 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 PRKAA2P54646 552 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 TAP2Q03519 686 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 SCAPQ12770 1279 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 G3BP1Q13283 466 aaKnown RBP eCLIP5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 DYRK1AQ13627 763 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 TRIM71Q2Q1W2 868 aaKnown RBP5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 FBXO47Q5MNV8 452 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 RBM20Q5T481 1227 aaKnown RBP5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 VPS53Q5VIR6 699 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 RINT1Q6NUQ1 792 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 MZT2AQ6P582 158 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 MAATS1Q7Z4T9 603 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 SLC44A2Q8IWA5 706 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 LRRC56Q8IYG6 542 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 Q8NA96 180 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 NAXEQ8NCW5 288 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 PPHLN1Q8NEY8 458 aaKnown RBP5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 IL17REQ8NFR9 667 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 CSGALNACT1Q8TDX6 532 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 RNF31Q96EP0 1072 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 FAM227BQ96M60 508 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 TOX2Q96NM4 488 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 HIST1H2AAQ96QV6 131 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 PYM1Q9BRP8 204 aaKnown RBP5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 PABPC3Q9H361 631 aaKnown RBP5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 TERF2IPQ9NYB0 399 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 GGA3Q9NZ52 723 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 PDP2Q9P2J9 529 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 DNAJB11Q9UBS4 358 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 FEM1BQ9UK73 627 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 MAP3K2Q9Y2U5 619 aa5.51□□□□□ -1.53
HMGB3P31-201ENST00000413333 FER1L4A9Z1Z3 1794 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 PRAMEF33A0A0G2JMD5 474 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 PNMA6EA0A0J9YXQ4 647 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 BTBD11A6QL63 1104 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 J3KRW8 73 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 CYP27B1O15528 508 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 PAX4O43316 350 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 TRIAP1O43715 76 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 PRAMEF10O60809 474 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 ZFPL1O95159 310 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 NTSR2O95665 410 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 ANXA6P08133 673 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 RXRAP19793 462 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 ACO1P21399 889 aaKnown RBP5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 CFPP27918 469 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 SLC5A2P31639 672 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 ADD2P35612 726 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 PAPOLAP51003 745 aaKnown RBP5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 PNLIPRP1P54315 467 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 RPS7P62081 194 aaKnown RBP5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 DDX10Q13206 875 aaKnown RBP5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 ATP1A4Q13733 1029 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 GRM4Q14833 912 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 BTBD16Q32M84 506 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 UBXN11Q5T124 520 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 DEPDC1Q5TB30 811 aa5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 NAIF1Q69YI7 327 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P31-201ENST00000413333 ABLIM2Q6H8Q1 611 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms