RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 NFIL3Q16649 462 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 CYP2A13Q16696 494 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 NADK2Q4G0N4 442 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 RNF19BQ6ZMZ0 732 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 HS2ST1Q7LGA3 356 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 ENAHQ8N8S7 591 aaPredicted RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 ZNF680Q8NEM1 530 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 TNFRSF25Q93038 417 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 ZUFSPQ96AP4 578 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 HEXIM2Q96MH2 286 aaKnown RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 PLIN2Q99541 437 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 CINPQ9BW66 212 aaPredicted RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 TXLNGQ9NUQ3 528 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 TBC1D23Q9NUY8 699 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 ZRANB1Q9UGI0 708 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 TRPS1Q9UHF7 1281 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 USP15Q9Y4E8 981 aaPredicted RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 SIGLEC1Q9BZZ2 1709 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 PRR23AA6NEV1 266 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 LRRIQ4A6NIV6 560 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 PI4K2BG5E9Z4 385 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 ENC1O14682 589 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 TNPO2O14787 897 aaKnown RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 USP2O75604 605 aaPredicted RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 GLAP06280 429 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 HOXB3P14651 431 aaPredicted RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 RPL5P46777 297 aaKnown RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 CARSP49589 748 aaKnown RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 SLC26A2P50443 739 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 NOP14P78316 857 aaKnown RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 GALK2Q01415 458 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 SF3A3Q12874 501 aaKnown RBP eCLIP5.45□□□□□ -1.54
HERC4-205ENST00000412272 PDE1CQ14123 709 aaPredicted RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 MAJINQ3KP22 176 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 AARDQ4LEZ3 155 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 ALFQ53S48 1182 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 TMTC3Q6ZXV5 915 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 SLFN11Q7Z7L1 901 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 ANKRD13CQ8N6S4 541 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 ZBTB38Q8NAP3 1195 aaPredicted RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 POMGNT1Q8WZA1 660 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 NCLNQ969V3 563 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 ZNF486Q96H40 463 aaPredicted RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 TNIP3Q96KP6 325 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 DDX47Q9H0S4 455 aaKnown RBP5.45□□□□□ -1.54
HERC4-205ENST00000412272 MVB12BQ9H7P6 319 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 DBNDD1Q9H9R9 158 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 CYP4F11Q9HBI6 524 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 TIGARQ9NQ88 270 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 USP40Q9NVE5 1235 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 ZDHHC7Q9NXF8 308 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 MBD2Q9UBB5 411 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 STK17AQ9UEE5 414 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 RWDD2AQ9UIY3 292 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 STON1Q9Y6Q2 735 aa5.45□□□□□ -1.54
HERC4-205ENST00000412272 LMO7Q8WWI1 1683 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 SH3D21A4FU49 640 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 PPP1R3GB7ZBB8 358 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 H0Y858 1186 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 RBAK-RBAKDNI3L0D1 243 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 CTNND1O60716 968 aaKnown RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 CCDC22O60826 627 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 TCEA3O75764 348 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 DCTN3O75935 186 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 ATP5BP06576 529 aaKnown RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 WEE2P0C1S8 567 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 ALOX12P18054 663 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 CAP2P40123 477 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 SLCO1A2P46721 670 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 ATP5OP48047 213 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 MRPS5P82675 430 aaKnown RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 TRIM32Q13049 653 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 PTK2BQ14289 1009 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 CFAP221Q4G0U5 840 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 GTF2IRD2BQ6EKJ0 949 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 POTEHQ6S545 545 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 GTF2IRD2Q86UP8 949 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 STK32CQ86UX6 486 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 COL23A1Q86Y22 540 aaPredicted RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 TRMT44Q8IYL2 757 aaKnown RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 OR8H2Q8N162 312 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 ENKURQ8TC29 256 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 CAPSLQ8WWF8 208 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 HPS1Q92902 700 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 OLFM1Q99784 485 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 GAL3ST1Q99999 423 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 DSCC1Q9BVC3 393 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 ACAT2Q9BWD1 397 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 LHX5Q9H2C1 402 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 VPS37BQ9H9H4 285 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 STMN3Q9NZ72 180 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 ADGRE2Q9UHX3 823 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 NFU1Q9UMS0 254 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 RIPK3Q9Y572 518 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 TAF6LQ9Y6J9 622 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 LMTK3Q96Q04 1460 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 A0A0D9SFI3 127 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 BTNL10A8MVZ5 291 aa5.44□□□□□ -1.54
HERC4-205ENST00000412272 RNF225M0QZC1 329 aaPredicted RBP5.44□□□□□ -1.54
HERC4-205ENST00000412272 ZBTB39O15060 712 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms