RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 FGF5P12034 268 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 ALAS1P13196 640 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 TFE3P19532 575 aaPredicted RBP-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 AOAHP28039 575 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 SHC1P29353 583 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 RDXP35241 583 aaKnown RBP-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 APLNRP35414 380 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 THBS4P35443 961 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 PTGER3P43115 390 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 HSD11B2P80365 405 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 EMX1Q04741 257 aaPredicted RBP-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 GRB10Q13322 594 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 KRTAP19-6Q3LI70 58 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 PLAC9Q5JTB6 97 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 TDRD10Q5VZ19 366 aaKnown RBP-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 CREB3L3Q68CJ9 461 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 FIP1L1Q6UN15 594 aaKnown RBP-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 TFAP2EQ6VUC0 442 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 IL17RELQ6ZVW7 336 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 BRINP3Q76B58 766 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 CCDC84Q86UT8 332 aaPredicted RBP-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 HSCBQ8IWL3 235 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 H1FOOQ8IZA3 346 aaPredicted RBP-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 TMEM199Q8N511 208 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 Q8NDZ9 215 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 ADCY4Q8NFM4 1077 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 GADD45GIP1Q8TAE8 222 aaPredicted RBP-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 FAM76AQ8TAV0 307 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 ZNF296Q8WUU4 475 aaPredicted RBP-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 LPIN2Q92539 896 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 DIO2Q92813 273 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 ZNF501Q96CX3 271 aaPredicted RBP-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 ATG4CQ96DT6 458 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 PBKQ96KB5 322 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 ZNF382Q96SR6 550 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 ZFYVE21Q9BQ24 234 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 TXNRD2Q9NNW7 524 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 RNF19AQ9NV58 838 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 HIF1ANQ9NWT6 349 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 TFCP2L1Q9NZI6 479 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 CAMSAP3Q9P1Y5 1249 aaPredicted RBP-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 MAN1B1Q9UKM7 699 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 PCDHA13Q9Y5I0 950 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 PKHD1L1Q86WI1 4243 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 ALMS1Q8TCU4 4167 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 WNK1Q9H4A3 2382 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 PCNX1Q96RV3 2341 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 IGKV1-6A0A0C4DH72 117 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 ZNF878C9JN71 531 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 H0Y9J4 135 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 MEFVO15553 781 aaPredicted RBP-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 KCNQ3O43525 872 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 CHRM5P08912 532 aaPredicted RBP-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 NR2F6P10588 404 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 NDUFB7P17568 137 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 AMD1P17707 334 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 MSR1P21757 451 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 PDHA2P29803 388 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 CIITAP33076 1130 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 ALDH7A1P49419 539 aaKnown RBP-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 RPS13P62277 151 aaKnown RBP-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 IRX3P78415 501 aaPredicted RBP-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 ADARB1P78563 741 aaKnown RBP-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 RUNX1T1Q06455 604 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 SPOCK1Q08629 439 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 MAP4K2Q12851 820 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 KIR2DS5Q14953 304 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 TCEAL1Q15170 157 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 KIF19Q2TAC6 998 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 HDGFL1Q5TGJ6 251 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 FOXR2Q6PJQ5 311 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 CLNKQ7Z7G1 428 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 EXOC2Q96KP1 924 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 PHACTR3Q96KR7 559 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 ORAI2Q96SN7 254 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 RTN4RQ9BZR6 473 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 REXO4Q9GZR2 422 aaKnown RBP-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 EXOSC3Q9NQT5 275 aaKnown RBP-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 KLC4Q9NSK0 619 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 SERTAD4Q9NUC0 356 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 PLAC8Q9NZF1 115 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 BTBD7Q9P203 1132 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 ZNF180Q9UJW8 692 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 PCDHA2Q9Y5H9 948 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 DNAH6Q9C0G6 4158 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 SPTBN2O15020 2390 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 PTCH1Q13635 1447 aa-1.15□□□□□ -2.59
RNU4-88P-201ENST00000411220 ASXL3Q9C0F0 2248 aa-1.16□□□□□ -2.59
RNU4-88P-201ENST00000411220 IGKV1D-37A0A075B6S9 117 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 KIR2DS5A0A0G2JLQ3 304 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 SERPINE3A8MV23 424 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 VWC2LB2RUY7 222 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 B5MCH6 92 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 POC1B-GALNT4F8VUJ3 575 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 XPNPEP2O43895 674 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 VEGFDO43915 354 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 CCNT1O60563 726 aaKnown RBP-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 ALDH1A2O94788 518 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 EPN2O95208 641 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 NTSR2O95665 410 aa-1.16□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms