RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 TNK2Q07912 1038 aa20.87■□□□□ 0.93
TSPAN4-209ENST00000409543 ITPRIPL2Q3MIP1 535 aa20.87■□□□□ 0.93
TSPAN4-209ENST00000409543 COBLL1Q53SF7 1204 aa20.87■□□□□ 0.93
TSPAN4-209ENST00000409543 ZNF658Q5TYW1 1059 aaPredicted RBP20.87■□□□□ 0.93
TSPAN4-209ENST00000409543 ZC3H14Q6PJT7 736 aaKnown RBP20.87■□□□□ 0.93
TSPAN4-209ENST00000409543 TTC8Q8TAM2 541 aa20.87■□□□□ 0.93
TSPAN4-209ENST00000409543 SPATA20Q8TB22 786 aa20.87■□□□□ 0.93
TSPAN4-209ENST00000409543 CYP2S1Q96SQ9 504 aa20.87■□□□□ 0.93
TSPAN4-209ENST00000409543 TMEM30AQ9NV96 361 aa20.87■□□□□ 0.93
TSPAN4-209ENST00000409543 TRPM5Q9NZQ8 1165 aa20.87■□□□□ 0.93
TSPAN4-209ENST00000409543 HOOK1Q9UJC3 728 aaKnown RBP20.87■□□□□ 0.93
TSPAN4-209ENST00000409543 R4GN57 208 aa20.87■□□□□ 0.93
TSPAN4-209ENST00000409543 ANAPC1Q9H1A4 1944 aa20.86■□□□□ 0.93
TSPAN4-209ENST00000409543 ATP8B3O60423 1300 aa20.86■□□□□ 0.93
TSPAN4-209ENST00000409543 CLDN5O00501 218 aa20.86■□□□□ 0.93
TSPAN4-209ENST00000409543 TRIM49P0CI25 452 aa20.86■□□□□ 0.93
TSPAN4-209ENST00000409543 TRIM49CP0CI26 452 aa20.86■□□□□ 0.93
TSPAN4-209ENST00000409543 PFKLP17858 780 aa20.86■□□□□ 0.93
TSPAN4-209ENST00000409543 PRCPP42785 496 aa20.86■□□□□ 0.93
TSPAN4-209ENST00000409543 PPP3CCP48454 512 aa20.86■□□□□ 0.93
TSPAN4-209ENST00000409543 GCLMP48507 274 aa20.86■□□□□ 0.93
TSPAN4-209ENST00000409543 PDE6CP51160 858 aa20.86■□□□□ 0.93
TSPAN4-209ENST00000409543 PPP3CAQ08209 521 aa20.86■□□□□ 0.93
TSPAN4-209ENST00000409543 MTAPQ13126 283 aa20.86■□□□□ 0.93
TSPAN4-209ENST00000409543 CC2D1AQ6P1N0 951 aaPredicted RBP20.86■□□□□ 0.93
TSPAN4-209ENST00000409543 RIN3Q8TB24 985 aa20.86■□□□□ 0.93
TSPAN4-209ENST00000409543 SLC22A12Q96S37 553 aa20.86■□□□□ 0.93
TSPAN4-209ENST00000409543 GTPBP4Q9BZE4 634 aaKnown RBP20.86■□□□□ 0.93
TSPAN4-209ENST00000409543 PCDHA5Q9Y5H7 936 aa20.86■□□□□ 0.93
TSPAN4-209ENST00000409543 RIF1Q5UIP0 2472 aaKnown RBP20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 C2orf78A6NCI8 922 aa20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 CETN3O15182 167 aa20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 CKMP06732 381 aa20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 HDCP19113 662 aa20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 GTF2H1P32780 548 aa20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 ASPAP45381 313 aa20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 CSTF1Q05048 431 aaKnown RBP20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 RUNX3Q13761 415 aa20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 LRRC32Q14392 662 aa20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 PDGFRLQ15198 375 aa20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 SPOPLQ6IQ16 392 aa20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 TXNDC11Q6PKC3 985 aa20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 PAQR9Q6ZVX9 377 aa20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 UNC93AQ86WB7 457 aa20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 ELOA2Q8IYF1 753 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 CRYBG2Q8N1P7 616 aa20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 ARL14EPQ8N8R7 260 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 TAS1R2Q8TE23 839 aa20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 SMARCE1Q969G3 411 aa20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 IMPG2Q9BZV3 1241 aa20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 HPS4Q9NQG7 708 aa20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 PRMT8Q9NR22 394 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-209ENST00000409543 MYO15AQ9UKN7 3530 aa20.84■□□□□ 0.93
TSPAN4-209ENST00000409543 FANCMQ8IYD8 2048 aa20.84■□□□□ 0.93
TSPAN4-209ENST00000409543 ZNF840PA6NDX5 716 aa20.84■□□□□ 0.93
TSPAN4-209ENST00000409543 NDST1P52848 882 aa20.84■□□□□ 0.93
TSPAN4-209ENST00000409543 MTF1Q14872 753 aa20.84■□□□□ 0.93
TSPAN4-209ENST00000409543 ZNF77Q15935 545 aa20.84■□□□□ 0.93
TSPAN4-209ENST00000409543 ACOT1Q86TX2 421 aa20.84■□□□□ 0.93
TSPAN4-209ENST00000409543 FAM35AQ86V20 835 aa20.84■□□□□ 0.93
TSPAN4-209ENST00000409543 NUP93Q8N1F7 819 aa20.84■□□□□ 0.93
TSPAN4-209ENST00000409543 MED10Q9BTT4 135 aa20.84■□□□□ 0.93
TSPAN4-209ENST00000409543 EBF3Q9H4W6 596 aa20.84■□□□□ 0.93
TSPAN4-209ENST00000409543 CYP3A43Q9HB55 503 aa20.84■□□□□ 0.93
TSPAN4-209ENST00000409543 TMEM8AQ9HCN3 771 aa20.84■□□□□ 0.93
TSPAN4-209ENST00000409543 ARHGAP26Q9UNA1 814 aa20.84■□□□□ 0.93
TSPAN4-209ENST00000409543 TCF3P15923 654 aa20.83■□□□□ 0.93
TSPAN4-209ENST00000409543 TAF10Q12962 218 aa20.83■□□□□ 0.93
TSPAN4-209ENST00000409543 USP4Q13107 963 aa20.83■□□□□ 0.93
TSPAN4-209ENST00000409543 DGKKQ5KSL6 1271 aa20.83■□□□□ 0.93
TSPAN4-209ENST00000409543 TRIM68Q6AZZ1 485 aa20.83■□□□□ 0.93
TSPAN4-209ENST00000409543 FUKQ8N0W3 1084 aa20.83■□□□□ 0.93
TSPAN4-209ENST00000409543 NELL1Q92832 810 aa20.83■□□□□ 0.93
TSPAN4-209ENST00000409543 ERCC4Q92889 916 aaPredicted RBP20.83■□□□□ 0.93
TSPAN4-209ENST00000409543 EEF2KMTQ96G04 330 aa20.83■□□□□ 0.93
TSPAN4-209ENST00000409543 SMARCD1Q96GM5 515 aa20.83■□□□□ 0.93
TSPAN4-209ENST00000409543 SLITRK1Q96PX8 696 aa20.83■□□□□ 0.93
TSPAN4-209ENST00000409543 KCNK16Q96T55 309 aa20.83■□□□□ 0.93
TSPAN4-209ENST00000409543 TSG101Q99816 390 aa20.83■□□□□ 0.93
TSPAN4-209ENST00000409543 MMRN2Q9H8L6 949 aa20.83■□□□□ 0.93
TSPAN4-209ENST00000409543 PTPRZ1P23471 2315 aaPredicted RBP20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 OTOL1A6NHN0 477 aaPredicted RBP20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 STX10O60499 249 aa20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 RTN3O95197 1032 aaPredicted RBP20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 LMNAP02545 664 aaKnown RBP20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 EPB41P11171 864 aaKnown RBP20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 ARSAP15289 507 aa20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 YWHAQP27348 245 aa20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 CCR3P51677 355 aa20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 INCA1Q0VD86 236 aa20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 PON2Q15165 354 aa20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 WDR44Q5JSH3 913 aa20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 KRT39Q6A163 491 aa20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 CCDC150Q8NCX0 1101 aa20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 SH3RF2Q8TEC5 729 aa20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 OSCP1Q8WVF1 389 aa20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 FAM126AQ9BYI3 521 aaPredicted RBP20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 APOBEC3GQ9HC16 384 aaKnown RBP20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 DMAP1Q9NPF5 467 aaPredicted RBP20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.82■□□□□ 0.925e-7■■■■■ 86.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms