RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 FAM43BQ6ZT52 329 aaPredicted RBP16.5■□□□□ 0.23
SHANK2-204ENST00000409530 SLC39A11Q8N1S5 342 aa16.5■□□□□ 0.23
SHANK2-204ENST00000409530 HERVK_113Q902F9 699 aa16.5■□□□□ 0.23
SHANK2-204ENST00000409530 RNPC3Q96LT9 517 aaKnown RBP16.5■□□□□ 0.23
SHANK2-204ENST00000409530 STRIP2Q9ULQ0 834 aa16.5■□□□□ 0.23
SHANK2-204ENST00000409530 PTPRDP23468 1912 aa16.5■□□□□ 0.23
SHANK2-204ENST00000409530 PLXNA4Q9HCM2 1894 aa16.5■□□□□ 0.23
SHANK2-204ENST00000409530 CHD9Q3L8U1 2897 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 ADAM12O43184 909 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 SPOPO43791 374 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 SETSIPP0DME0 302 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 GRIK1P39086 918 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 GPR15P49685 360 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 NDUFV1P49821 464 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 PSMD5Q16401 504 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 USP41Q3LFD5 358 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 LRRC57Q8N9N7 239 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 ATAD1Q8NBU5 361 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 GPR152Q8TDT2 470 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 MRPL47Q9HD33 250 aaKnown RBP16.49■□□□□ 0.23
SHANK2-204ENST00000409530 AVENQ9NQS1 362 aaPredicted RBP16.49■□□□□ 0.23
SHANK2-204ENST00000409530 UVRAGQ9P2Y5 699 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 INSL6Q9Y581 213 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 F8VP50 259 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 TNRC18O15417 2968 aaPredicted RBP16.49■□□□□ 0.23
SHANK2-204ENST00000409530 GABBR2O75899 941 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 OAZ2O95190 189 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 KRT3P12035 628 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 PAX3P23760 479 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 PLCB3Q01970 1234 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 PLEKHA7Q6IQ23 1121 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 SIX6OS1Q8N1H7 587 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 C3orf20Q8ND61 904 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 SLC9A7Q96T83 725 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 PKMYT1Q99640 499 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 SEPT5Q99719 369 aaPredicted RBP16.49■□□□□ 0.23
SHANK2-204ENST00000409530 ZCWPW1Q9H0M4 648 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 MTIF3Q9H2K0 278 aaKnown RBP16.49■□□□□ 0.23
SHANK2-204ENST00000409530 LRRC4Q9HBW1 653 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 SPG21Q9NZD8 308 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 SLC27A5Q9Y2P5 690 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 PCDHB12Q9Y5F1 795 aa16.49■□□□□ 0.23
SHANK2-204ENST00000409530 MYO16Q9Y6X6 1858 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 XPO1O14980 1071 aaKnown RBP16.48■□□□□ 0.23
SHANK2-204ENST00000409530 ZNF185O15231 689 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 PAPSS1O43252 624 aaPredicted RBP16.48■□□□□ 0.23
SHANK2-204ENST00000409530 COMTP21964 271 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 CTNNB1P35222 781 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 RFC1P35251 1148 aaPredicted RBP16.48■□□□□ 0.23
SHANK2-204ENST00000409530 OGDHQ02218 1023 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 CDO1Q16878 200 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 PPP1R2P3Q6NXS1 205 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 FAM171BQ6P995 826 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 VPS52Q8N1B4 723 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 ZMIZ2Q8NF64 920 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 FEZF2Q8TBJ5 459 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 FAM149B1Q96BN6 582 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 VCPIP1Q96JH7 1222 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 EHD2Q9NZN4 543 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 JRKLQ9Y4A0 524 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 MYO1FO00160 1098 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 FGF18O76093 207 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 FAM163BP0C2L3 166 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 PLA2G4AP47712 749 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 MARCKSL1P49006 195 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 TKTL1P51854 596 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 HTRA4P83105 476 aaPredicted RBP16.48■□□□□ 0.23
SHANK2-204ENST00000409530 SHHQ15465 462 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 RNF19BQ6ZMZ0 732 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 C4orf50Q6ZRC1 276 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 ANKS3Q6ZW76 656 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 DCP1BQ8IZD4 617 aaKnown RBP16.48■□□□□ 0.23
SHANK2-204ENST00000409530 ALG13Q9NP73 1137 aaKnown RBP16.48■□□□□ 0.23
SHANK2-204ENST00000409530 SMARCAL1Q9NZC9 954 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 ALG6Q9Y672 507 aa16.48■□□□□ 0.23
SHANK2-204ENST00000409530 ARHGEF15O94989 841 aa16.47■□□□□ 0.23
SHANK2-204ENST00000409530 OR1D2P34982 312 aa16.47■□□□□ 0.23
SHANK2-204ENST00000409530 GLUD2P49448 558 aa16.47■□□□□ 0.23
SHANK2-204ENST00000409530 LLGL1Q15334 1064 aa16.47■□□□□ 0.23
SHANK2-204ENST00000409530 MAPRE1Q15691 268 aaKnown RBP16.47■□□□□ 0.23
SHANK2-204ENST00000409530 DDR2Q16832 855 aa16.47■□□□□ 0.23
SHANK2-204ENST00000409530 SYCE1Q8N0S2 351 aa16.47■□□□□ 0.23
SHANK2-204ENST00000409530 KLHL23Q8NBE8 558 aa16.47■□□□□ 0.23
SHANK2-204ENST00000409530 FBXO22Q8NEZ5 403 aa16.47■□□□□ 0.23
SHANK2-204ENST00000409530 SPATA18Q8TC71 538 aa16.47■□□□□ 0.23
SHANK2-204ENST00000409530 RAD9AQ99638 391 aa16.47■□□□□ 0.23
SHANK2-204ENST00000409530 TLR10Q9BXR5 811 aa16.47■□□□□ 0.23
SHANK2-204ENST00000409530 SLC4A5Q9BY07 1137 aa16.47■□□□□ 0.23
SHANK2-204ENST00000409530 DMAP1Q9NPF5 467 aaPredicted RBP16.47■□□□□ 0.23
SHANK2-204ENST00000409530 KLHL11Q9NVR0 708 aa16.47■□□□□ 0.23
SHANK2-204ENST00000409530 AMFRQ9UKV5 643 aa16.47■□□□□ 0.23
SHANK2-204ENST00000409530 KCNK3O14649 394 aa16.46■□□□□ 0.23
SHANK2-204ENST00000409530 SOD2P04179 222 aa16.46■□□□□ 0.23
SHANK2-204ENST00000409530 URODP06132 367 aa16.46■□□□□ 0.23
SHANK2-204ENST00000409530 PSMA2P25787 234 aa16.46■□□□□ 0.23
SHANK2-204ENST00000409530 ZNF252P-AS1Q0IIN9 211 aa16.46■□□□□ 0.23
SHANK2-204ENST00000409530 MGAT5BQ3V5L5 792 aa16.46■□□□□ 0.23
SHANK2-204ENST00000409530 MEI1Q5TIA1 1274 aa16.46■□□□□ 0.23
SHANK2-204ENST00000409530 OLFML1Q6UWY5 402 aa16.46■□□□□ 0.23
SHANK2-204ENST00000409530 NT5DC3Q86UY8 548 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms