RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 PI4K2AQ9BTU6 479 aa8.32□□□□□ -1.08
LSM5-202ENST00000409292 CCSER1Q9C0I3 900 aa8.32□□□□□ -1.08
LSM5-202ENST00000409292 HPS4Q9NQG7 708 aa8.32□□□□□ -1.08
LSM5-202ENST00000409292 BCCIPQ9P287 314 aaKnown RBP eCLIP8.32□□□□□ -1.08
LSM5-202ENST00000409292 CPSF3Q9UKF6 684 aaKnown RBP8.32□□□□□ -1.08
LSM5-202ENST00000409292 AGO2Q9UKV8 859 aaKnown RBP8.32□□□□□ -1.08
LSM5-202ENST00000409292 ZMIZ1Q9ULJ6 1067 aa8.32□□□□□ -1.08
LSM5-202ENST00000409292 DMXL1Q9Y485 3027 aa8.32□□□□□ -1.08
LSM5-202ENST00000409292 MYH11P35749 1972 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 KMT2BQ9UMN6 2715 aaPredicted RBP8.31□□□□□ -1.08
LSM5-202ENST00000409292 ANO9A1A5B4 782 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.31□□□□□ -1.08
LSM5-202ENST00000409292 H0Y626 953 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 TRIM16O95361 564 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 F11P03951 625 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 ADRB2P07550 413 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 NFICP08651 508 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 ARSAP15289 507 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 HDCP19113 662 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 NMT1P30419 496 aaKnown RBP8.31□□□□□ -1.08
LSM5-202ENST00000409292 PPP3CCP48454 512 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 LHX1P48742 406 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 ACOT2P49753 483 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 MRPS21P82921 87 aaKnown RBP8.31□□□□□ -1.08
LSM5-202ENST00000409292 ATP2C1P98194 919 aaPredicted RBP8.31□□□□□ -1.08
LSM5-202ENST00000409292 MYO1EQ12965 1108 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 HNRNPDQ14103 355 aaKnown RBP8.31□□□□□ -1.08
LSM5-202ENST00000409292 EOGTQ5NDL2 527 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 WSCD1Q658N2 575 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 PMS2CLQ68D20 193 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 ANO7Q6IWH7 933 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 KCNK18Q7Z418 384 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 SCN4BQ8IWT1 228 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 PGBD3Q8N328 593 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 KDF1Q8NAX2 398 aaPredicted RBP8.31□□□□□ -1.08
LSM5-202ENST00000409292 FAM174AQ8TBP5 190 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 WHAMMQ8TF30 809 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 LEO1Q8WVC0 666 aaPredicted RBP8.31□□□□□ -1.08
LSM5-202ENST00000409292 PIGKQ92643 395 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 TRMT2BQ96GJ1 504 aaKnown RBP8.31□□□□□ -1.08
LSM5-202ENST00000409292 FUBP3Q96I24 572 aaKnown RBP eCLIP8.31□□□□□ -1.085e-8■■■□□ 17.6
LSM5-202ENST00000409292 CNOT6LQ96LI5 555 aaKnown RBP8.31□□□□□ -1.08
LSM5-202ENST00000409292 CEP295NLQ96MC4 621 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 ACBD6Q9BR61 282 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 REEP2Q9BRK0 252 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 SMOC1Q9H4F8 434 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 C2orf42Q9NWW7 574 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 DDX43Q9NXZ2 648 aaKnown RBP8.31□□□□□ -1.08
LSM5-202ENST00000409292 WDR87Q6ZQQ6 2873 aa8.31□□□□□ -1.08
LSM5-202ENST00000409292 ZNF638Q14966 1978 aaKnown RBP8.3□□□□□ -1.08
LSM5-202ENST00000409292 LNP1A1A4G5 178 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 C1QTNF9BB2RNN3 333 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 PPEF2O14830 753 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 CAPN5O15484 640 aaPredicted RBP8.3□□□□□ -1.08
LSM5-202ENST00000409292 MEFVO15553 781 aaPredicted RBP8.3□□□□□ -1.08
LSM5-202ENST00000409292 NOL4O94818 638 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 ADH1CP00326 375 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 APODP05090 189 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 KRT19P08727 400 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 C1QTNF9P0C862 333 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 HMGA1P17096 107 aaKnown RBP8.3□□□□□ -1.08
LSM5-202ENST00000409292 TXLNAP40222 546 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 TFAMQ00059 246 aaKnown RBP8.3□□□□□ -1.08
LSM5-202ENST00000409292 GTF2BQ00403 316 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 ACAP1Q15027 740 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 DDR2Q16832 855 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 C2orf27AQ580R0 203 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 WDR44Q5JSH3 913 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 INTS6LQ5JSJ4 861 aaKnown RBP8.3□□□□□ -1.08
LSM5-202ENST00000409292 SPDYCQ5MJ68 293 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 BTBD8Q5XKL5 378 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 TCEAL6Q6IPX3 200 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 PKN3Q6P5Z2 889 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 TRMT11Q7Z4G4 463 aaKnown RBP8.3□□□□□ -1.08
LSM5-202ENST00000409292 DDX42Q86XP3 938 aaKnown RBP eCLIP8.3□□□□□ -1.08
LSM5-202ENST00000409292 SYCP3Q8IZU3 236 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 LRRC52Q8N7C0 313 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 KIAA1958Q8N8K9 716 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 ARMC2Q8NEN0 867 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 CEP76Q8TAP6 659 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 SH3RF2Q8TEC5 729 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 ZCCHC14Q8WYQ9 949 aaKnown RBP8.3□□□□□ -1.08
LSM5-202ENST00000409292 TCEAL3Q969E4 200 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 CHFRQ96EP1 664 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 PNMA5Q96PV4 448 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 MMTAG2Q9BU76 263 aaKnown RBP8.3□□□□□ -1.08
LSM5-202ENST00000409292 TPSD1Q9BZJ3 242 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 RXFP3Q9NSD7 469 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 TRPM5Q9NZQ8 1165 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 MAGEC2Q9UBF1 373 aaPredicted RBP8.3□□□□□ -1.08
LSM5-202ENST00000409292 CCDC39Q9UFE4 941 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 EVLQ9UI08 416 aaPredicted RBP8.3□□□□□ -1.08
LSM5-202ENST00000409292 MMP17Q9ULZ9 603 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 CCL26Q9Y258 94 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 WNT6Q9Y6F9 365 aa8.3□□□□□ -1.08
LSM5-202ENST00000409292 DNAH14Q0VDD8 3507 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 NPHP3-ACAD11A0A0J9YXS1 232 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 TNFRSF10BO14763 440 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 DCLK1O15075 740 aa8.29□□□□□ -1.08
LSM5-202ENST00000409292 TMEM191BP0C7N4 346 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms