RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 TAF1DQ9H5J8 278 aaPredicted RBP17.12■□□□□ 0.33
CBX6-202ENST00000407418 DTNAQ9Y4J8 743 aa17.12■□□□□ 0.33
CBX6-202ENST00000407418 GYG2O15488 501 aa17.12■□□□□ 0.33
CBX6-202ENST00000407418 BYSLQ13895 437 aaKnown RBP17.12■□□□□ 0.33
CBX6-202ENST00000407418 LRRC8EQ6NSJ5 796 aa17.12■□□□□ 0.33
CBX6-202ENST00000407418 OSGEPL1Q9H4B0 414 aa17.12■□□□□ 0.33
CBX6-202ENST00000407418 SNX5Q9Y5X3 404 aa17.12■□□□□ 0.33
CBX6-202ENST00000407418 SPATA31D1Q6ZQQ2 1576 aa17.12■□□□□ 0.33
CBX6-202ENST00000407418 CRTAMO95727 393 aa17.12■□□□□ 0.33
CBX6-202ENST00000407418 GNRH1P01148 92 aa17.12■□□□□ 0.33
CBX6-202ENST00000407418 ARFIP2P53365 341 aa17.12■□□□□ 0.33
CBX6-202ENST00000407418 GYS2P54840 703 aa17.12■□□□□ 0.33
CBX6-202ENST00000407418 PRKAA1Q13131 559 aa17.12■□□□□ 0.33
CBX6-202ENST00000407418 MAP2K5Q13163 448 aa17.12■□□□□ 0.33
CBX6-202ENST00000407418 FRMD8P1Q9BZ68 369 aaPredicted RBP17.12■□□□□ 0.33
CBX6-202ENST00000407418 MRFAP1Q9Y605 127 aa17.12■□□□□ 0.33
CBX6-202ENST00000407418 NWD1Q149M9 1564 aa17.12■□□□□ 0.33
CBX6-202ENST00000407418 CSE1LP55060 971 aaKnown RBP17.12■□□□□ 0.33
CBX6-202ENST00000407418 GPRC5CQ9NQ84 441 aa17.12■□□□□ 0.33
CBX6-202ENST00000407418 CYP2A6P11509 494 aaPredicted RBP17.11■□□□□ 0.33
CBX6-202ENST00000407418 BEX3Q00994 111 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 CENPCQ03188 943 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 SMARCD1Q96GM5 515 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 BRD8Q9H0E9 1235 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 ADGRA2Q96PE1 1338 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 CCDC22O60826 627 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 HAUS5O94927 633 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 PDK2Q15119 407 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 GRAMD1BQ3KR37 738 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 RETSATQ6NUM9 610 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 NIPA1Q7RTP0 329 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 METTL16Q86W50 562 aaKnown RBP17.11■□□□□ 0.33
CBX6-202ENST00000407418 MAGEB10Q96LZ2 347 aaPredicted RBP17.11■□□□□ 0.33
CBX6-202ENST00000407418 ZC4H2Q9NQZ6 224 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 TMEM161AQ9NX61 479 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 PTPRAP18433 802 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 YWHAQP27348 245 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 NDUFV1P49821 464 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 PABPC1LQ4VXU2 614 aaKnown RBP17.11■□□□□ 0.33
CBX6-202ENST00000407418 BCL9O00512 1426 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 CBX4O00257 560 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 TEX33O43247 280 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 POU4F1Q01851 419 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 ACAD10Q6JQN1 1059 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 SLC30A10Q6XR72 485 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 SMYD3Q9H7B4 428 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 SLC24A3Q9HC58 644 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 CAPN10Q9HC96 672 aa17.11■□□□□ 0.33
CBX6-202ENST00000407418 SSU72P8A0A1W2PR75 194 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 TLL1O43897 1013 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 PMPCBO75439 489 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 KRT20P35900 424 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 SMTNL2Q2TAL5 461 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 PPCSQ9HAB8 311 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 SNCAIPQ9Y6H5 919 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 VWDEQ8N2E2 1590 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 PSMD12O00232 456 aaPredicted RBP17.1■□□□□ 0.33
CBX6-202ENST00000407418 PNMA6AP0CW24 399 aaPredicted RBP17.1■□□□□ 0.33
CBX6-202ENST00000407418 CNTN1Q12860 1018 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 DGKZQ13574 1117 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 NAB2Q15742 525 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 PPP1R16AQ96I34 528 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 IDI2Q9BXS1 227 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 SPASTQ9UBP0 616 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 NDUFB5O43674 189 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 RAP1GAPP47736 663 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 COG1Q8WTW3 980 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 TMEM176AQ96HP8 235 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 KIDINS220Q9ULH0 1771 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 MLNP12872 115 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 POLR2EP19388 210 aaKnown RBP17.1■□□□□ 0.33
CBX6-202ENST00000407418 CENPAP49450 140 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 TKTL1P51854 596 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 MYO1HQ8N1T3 1032 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 ARL8AQ96BM9 186 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 ELAC2Q9BQ52 826 aaKnown RBP17.1■□□□□ 0.33
CBX6-202ENST00000407418 ZCCHC2Q9C0B9 1178 aaKnown RBP17.1■□□□□ 0.33
CBX6-202ENST00000407418 ZNF518BQ9C0D4 1074 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 KRCC1Q9NPI7 259 aaPredicted RBP17.1■□□□□ 0.33
CBX6-202ENST00000407418 RRN3Q9NYV6 651 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 VPS26AO75436 327 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 ITIH2P19823 946 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 PTPN3P26045 913 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 HDAC4P56524 1084 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 TBX4P57082 545 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 ZNF200P98182 395 aaPredicted RBP17.1■□□□□ 0.33
CBX6-202ENST00000407418 THOC1Q96FV9 657 aaKnown RBP17.1■□□□□ 0.33
CBX6-202ENST00000407418 YIPF3Q9GZM5 350 aa17.1■□□□□ 0.33
CBX6-202ENST00000407418 FGFR2P21802 821 aa17.09■□□□□ 0.33
CBX6-202ENST00000407418 MAP3K10Q02779 954 aa17.09■□□□□ 0.33
CBX6-202ENST00000407418 HIPK4Q8NE63 616 aa17.09■□□□□ 0.33
CBX6-202ENST00000407418 ACSF2Q96CM8 615 aaPredicted RBP17.09■□□□□ 0.33
CBX6-202ENST00000407418 WNK4Q96J92 1243 aa17.09■□□□□ 0.33
CBX6-202ENST00000407418 ADAM2Q99965 735 aa17.09■□□□□ 0.33
CBX6-202ENST00000407418 ELOVL4Q9GZR5 314 aa17.09■□□□□ 0.33
CBX6-202ENST00000407418 TRAV19A0A0A6YYK7 116 aa17.09■□□□□ 0.33
CBX6-202ENST00000407418 TMEM253P0C7T8 217 aa17.09■□□□□ 0.33
CBX6-202ENST00000407418 IL10P22301 178 aa17.09■□□□□ 0.33
CBX6-202ENST00000407418 SHMT1P34896 483 aa17.09■□□□□ 0.33
CBX6-202ENST00000407418 MRPS25P82663 173 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms