RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ATG16L2Q8NAA4 619 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 ZNF384Q8TF68 577 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 RNF31Q96EP0 1072 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 UBXN10Q96LJ8 280 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 PACSIN1Q9BY11 444 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 CHST8Q9H2A9 424 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 ITM2CQ9NQX7 267 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 DACT1Q9NYF0 836 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 RRN3Q9NYV6 651 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 CFAP97Q9P2B7 532 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 SWAP70Q9UH65 585 aa5.8□□□□□ -1.48
HMGB1P13-201ENST00000406019 ERN1O75460 977 aaKnown RBP5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 DNAJB5O75953 348 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 LMNAP02545 664 aaKnown RBP5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 GNAI3P08754 354 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 FAM163BP0C2L3 166 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 TXNP10599 105 aaKnown RBP5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 RARBP10826 455 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 MYL4P12829 197 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 KLRC1P26715 233 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 GABRB3P28472 473 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 MAN1A1P33908 653 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 KCNJ5P48544 419 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 ITGA8P53708 1063 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 GNAI1P63096 354 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 FSTL1Q12841 308 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 FOXD4Q12950 439 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 TBX2Q13207 712 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 RAB32Q13637 225 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 PRKG1Q13976 671 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 SLC44A4Q53GD3 710 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 RNF44Q7L0R7 432 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 SUGP1Q8IWZ8 645 aaKnown RBP5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 OR56A3Q8NH54 315 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 MUL1Q969V5 352 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 LTV1Q96GA3 475 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 SORBS1Q9BX66 1292 aaKnown RBP5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 BRD9Q9H8M2 597 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 GPR35Q9HC97 309 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 TMEM8AQ9HCN3 771 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 A1CFQ9NQ94 594 aaKnown RBP5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 NECTIN3Q9NQS3 549 aa5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P13-201ENST00000406019 SALL3Q9BXA9 1300 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 A0A087WZ62 844 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 SUN1O94901 812 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 GJB1P08034 283 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 HKR1P10072 659 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 PHKA1P46020 1223 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 CARSP49589 748 aaKnown RBP5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 INHBEP58166 350 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 POU6F2P78424 691 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 RAB30Q15771 203 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 SLC4A8Q2Y0W8 1093 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 INTS11Q5TA45 600 aaKnown RBP5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 WDR78Q5VTH9 848 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 LMBRD2Q68DH5 695 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 SP5Q6BEB4 398 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 TANGO2Q6ICL3 276 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 JMJD6Q6NYC1 403 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 LNX2Q8N448 690 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 GLIS1Q8NBF1 620 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 PDPRQ8NCN5 879 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 PPHLN1Q8NEY8 458 aaKnown RBP5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 FAM71BQ8TC56 605 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 STT3BQ8TCJ2 826 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 PPM1MQ96MI6 270 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 NELL2Q99435 816 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 EIF2AK1Q9BQI3 630 aaKnown RBP5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 PAGR1Q9BTK6 254 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 MRPS18AQ9NVS2 196 aaKnown RBP5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 ETAA1Q9NY74 926 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 RNF181Q9P0P0 153 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 LRFN1Q9P244 771 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 IGSF9Q9P2J2 1179 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 PLEKHM1Q9Y4G2 1056 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 NOX1Q9Y5S8 564 aa5.78□□□□□ -1.48
HMGB1P13-201ENST00000406019 FAM234BA2RU67 622 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 TMEM233B4DJY2 109 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 PODXLO00592 558 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 KCNQ3O43525 872 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 ESRRBO95718 433 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 NDST3O95803 873 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 ANXA1P04083 346 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 A1BGP04217 495 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 ITGA5P08648 1049 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 ITGAMP11215 1152 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 KCNA2P16389 499 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 FDXRP22570 491 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 SLC11A2P49281 568 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 CLK3P49761 638 aaKnown RBP5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 MC2RQ01718 297 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 SPDYE7PQ495Y7 208 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 LIN54Q6MZP7 749 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 KRT28Q7Z3Y7 464 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 CFAP52Q8N1V2 620 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 GALNT15Q8N3T1 639 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 DNAJC5GQ8N7S2 189 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 NAXEQ8NCW5 288 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms