RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 MMP8P22894 467 aa23.21■■□□□ 1.31
EPCAM-202ENST00000405271 PLA2G4AP47712 749 aa23.21■■□□□ 1.31
EPCAM-202ENST00000405271 SNX16P57768 344 aa23.21■■□□□ 1.31
EPCAM-202ENST00000405271 KIF5AQ12840 1032 aa23.21■■□□□ 1.31
EPCAM-202ENST00000405271 PTPN14Q15678 1187 aa23.21■■□□□ 1.31
EPCAM-202ENST00000405271 RSPO2Q6UXX9 243 aaPredicted RBP23.21■■□□□ 1.31
EPCAM-202ENST00000405271 CLEC20AQ6ZU45 233 aa23.21■■□□□ 1.31
EPCAM-202ENST00000405271 ERICH1Q86X53 443 aa23.21■■□□□ 1.31
EPCAM-202ENST00000405271 MCOLN2Q8IZK6 566 aa23.21■■□□□ 1.31
EPCAM-202ENST00000405271 SPPL2BQ8TCT7 592 aa23.21■■□□□ 1.31
EPCAM-202ENST00000405271 PACSIN1Q9BY11 444 aa23.21■■□□□ 1.31
EPCAM-202ENST00000405271 MIS12Q9H081 205 aa23.21■■□□□ 1.31
EPCAM-202ENST00000405271 CSNK1G1Q9HCP0 422 aa23.21■■□□□ 1.31
EPCAM-202ENST00000405271 STRIP2Q9ULQ0 834 aa23.21■■□□□ 1.31
EPCAM-202ENST00000405271 NCANO14594 1321 aa23.2■■□□□ 1.3
EPCAM-202ENST00000405271 KRT86O43790 486 aa23.2■■□□□ 1.3
EPCAM-202ENST00000405271 AP1G2O75843 785 aa23.2■■□□□ 1.3
EPCAM-202ENST00000405271 ROR1Q01973 937 aa23.2■■□□□ 1.3
EPCAM-202ENST00000405271 ZNF653Q96CK0 615 aa23.2■■□□□ 1.3
EPCAM-202ENST00000405271 PPP1R13BQ96KQ4 1090 aa23.2■■□□□ 1.3
EPCAM-202ENST00000405271 C11orf70Q9BRQ4 267 aa23.2■■□□□ 1.3
EPCAM-202ENST00000405271 RXFP1Q9HBX9 757 aa23.2■■□□□ 1.3
EPCAM-202ENST00000405271 ADAM22Q9P0K1 906 aa23.2■■□□□ 1.3
EPCAM-202ENST00000405271 CYTH4Q9UIA0 394 aa23.2■■□□□ 1.3
EPCAM-202ENST00000405271 MTMR11A4FU01 709 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 BTNL10A8MVZ5 291 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 ABCB4P21439 1286 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 MAGEA11P43364 429 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 NDUFV1P49821 464 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 GSCP56915 257 aaPredicted RBP23.19■■□□□ 1.3
EPCAM-202ENST00000405271 PTPN20Q4JDL3 420 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 ARHGAP29Q52LW3 1261 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 VSTM1Q6UX27 236 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 MMS22LQ6ZRQ5 1243 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 REXO1L1PQ8IX06 675 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 SPPL3Q8TCT6 385 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 MRPL38Q96DV4 380 aaKnown RBP23.19■■□□□ 1.3
EPCAM-202ENST00000405271 HSFY1Q96LI6 401 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 CLSTN3Q9BQT9 956 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 UBXN6Q9BZV1 441 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 PNPLA8Q9NP80 782 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 DMAP1Q9NPF5 467 aaPredicted RBP23.19■■□□□ 1.3
EPCAM-202ENST00000405271 TLR9Q9NR96 1032 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 ABI2Q9NYB9 513 aaPredicted RBP23.19■■□□□ 1.3
EPCAM-202ENST00000405271 IRAK3Q9Y616 596 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 DENND4CQ5VZ89 1909 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 OBSL1O75147 1896 aa23.19■■□□□ 1.3
EPCAM-202ENST00000405271 WDR27A2RRH5 827 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 RCCD1A6NED2 376 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 LILRB3O75022 631 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 BDNFP23560 247 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 OR1D2P34982 312 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 ACADSBP45954 432 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 RPL34P49207 117 aaKnown RBP23.18■■□□□ 1.3
EPCAM-202ENST00000405271 ARPP19P56211 112 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 GPC5P78333 572 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 PTP4A2Q12974 167 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 SMC1AQ14683 1233 aaKnown RBP23.18■■□□□ 1.3
EPCAM-202ENST00000405271 LIN9Q5TKA1 542 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 TPGS2Q68CL5 300 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 TMC7Q7Z402 723 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 POF1BQ8WVV4 589 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 CPXM1Q96SM3 734 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 SLC4A5Q9BY07 1137 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 THAP2Q9H0W7 228 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 ALG13Q9NP73 1137 aaKnown RBP23.18■■□□□ 1.3
EPCAM-202ENST00000405271 AVENQ9NQS1 362 aaPredicted RBP23.18■■□□□ 1.3
EPCAM-202ENST00000405271 ENTPD7Q9NQZ7 604 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 TRMT1Q9NXH9 659 aaKnown RBP23.18■■□□□ 1.3
EPCAM-202ENST00000405271 A0A0A6YYK5 440 aaPredicted RBP23.18■■□□□ 1.3
EPCAM-202ENST00000405271 USP27XA6NNY8 438 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 RPL17P18621 184 aaKnown RBP23.18■■□□□ 1.3
EPCAM-202ENST00000405271 GABRB2P47870 512 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 MAP3K7CLP57077 242 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 RAB33AQ14088 237 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 SKIV2LQ15477 1246 aaKnown RBP23.18■■□□□ 1.3
EPCAM-202ENST00000405271 PTPROQ16827 1216 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 PMF1Q6P1K2 205 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 DNAAF5Q86Y56 855 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 KCTD13Q8WZ19 329 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 RFFLQ8WZ73 363 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 C18orf8Q96DM3 657 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 SMOQ99835 787 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 TCF25Q9BQ70 676 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 LACRTQ9GZZ8 138 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 SYNCQ9H7C4 482 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 ST7Q9NRC1 585 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 WDR35Q9P2L0 1181 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 HSFX1Q9UBD0 423 aa23.18■■□□□ 1.3
EPCAM-202ENST00000405271 TULP2O00295 520 aa23.17■■□□□ 1.3
EPCAM-202ENST00000405271 TRIM66O15016 1216 aa23.17■■□□□ 1.3
EPCAM-202ENST00000405271 ADAM12O43184 909 aa23.17■■□□□ 1.3
EPCAM-202ENST00000405271 ARHGAP25P42331 645 aa23.17■■□□□ 1.3
EPCAM-202ENST00000405271 PDE12Q6L8Q7 609 aaKnown RBP23.17■■□□□ 1.3
EPCAM-202ENST00000405271 RNF19BQ6ZMZ0 732 aa23.17■■□□□ 1.3
EPCAM-202ENST00000405271 PIGZQ86VD9 579 aa23.17■■□□□ 1.3
EPCAM-202ENST00000405271 RHOT2Q8IXI1 618 aa23.17■■□□□ 1.3
EPCAM-202ENST00000405271 ZMIZ2Q8NF64 920 aa23.17■■□□□ 1.3
EPCAM-202ENST00000405271 ZNF461Q8TAF7 563 aa23.17■■□□□ 1.3
EPCAM-202ENST00000405271 AUTS2Q8WXX7 1259 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms