RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 DDHD2O94830 711 aa22.13■■□□□ 1.13
TPM1-208ENST00000404484 LINC00271P0C7V0 271 aa22.13■■□□□ 1.13
TPM1-208ENST00000404484 CCDC130P13994 396 aa22.13■■□□□ 1.13
TPM1-208ENST00000404484 CTNNA2P26232 953 aa22.13■■□□□ 1.13
TPM1-208ENST00000404484 ITIH3Q06033 890 aa22.13■■□□□ 1.13
TPM1-208ENST00000404484 CLUL1Q15846 466 aa22.13■■□□□ 1.13
TPM1-208ENST00000404484 PPP1R15BQ5SWA1 713 aa22.13■■□□□ 1.13
TPM1-208ENST00000404484 CYP4A22Q5TCH4 519 aa22.13■■□□□ 1.13
TPM1-208ENST00000404484 CD300LGQ6UXG3 332 aa22.13■■□□□ 1.13
TPM1-208ENST00000404484 XYLT1Q86Y38 959 aa22.13■■□□□ 1.13
TPM1-208ENST00000404484 ZNF280BQ86YH2 543 aa22.13■■□□□ 1.13
TPM1-208ENST00000404484 THEM5Q8N1Q8 247 aa22.13■■□□□ 1.13
TPM1-208ENST00000404484 SLC2A14Q8TDB8 520 aa22.13■■□□□ 1.13
TPM1-208ENST00000404484 SLC35F5Q8WV83 523 aa22.13■■□□□ 1.13
TPM1-208ENST00000404484 RABGGTAQ92696 567 aa22.13■■□□□ 1.13
TPM1-208ENST00000404484 BTBD6Q96KE9 485 aa22.13■■□□□ 1.13
TPM1-208ENST00000404484 PRRC2BQ5JSZ5 2229 aaKnown RBP22.13■■□□□ 1.13
TPM1-208ENST00000404484 TMEM191CA6NGB0 347 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 SIGLEC16A6NMB1 481 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 DDX3YO15523 660 aaKnown RBP22.12■■□□□ 1.13
TPM1-208ENST00000404484 HCRTO43612 131 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 ERBB2P04626 1255 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 IGFBP4P22692 258 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 IGFBP6P24592 240 aaPredicted RBP22.12■■□□□ 1.13
TPM1-208ENST00000404484 ADORA2BP29275 332 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 ACADSBP45954 432 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 BRCC3P46736 316 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 OR1G1P47890 313 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 PAN2Q504Q3 1202 aaKnown RBP22.12■■□□□ 1.13
TPM1-208ENST00000404484 LLGL2Q6P1M3 1020 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 ZDHHC17Q8IUH5 632 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 MCEEQ96PE7 176 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 ACBD6Q9BR61 282 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 SLC4A5Q9BY07 1137 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 LPXNO60711 386 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 KRT3P12035 628 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 ACAT1P24752 427 aaKnown RBP22.12■■□□□ 1.13
TPM1-208ENST00000404484 CTNNA1P35221 906 aaKnown RBP22.12■■□□□ 1.13
TPM1-208ENST00000404484 PLCB3Q01970 1234 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 PDE4CQ08493 712 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 PTPROQ16827 1216 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 CMTR2Q8IYT2 770 aaKnown RBP22.12■■□□□ 1.13
TPM1-208ENST00000404484 FNIP1Q8TF40 1166 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 CD101Q93033 1021 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 MCRS1Q96EZ8 462 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 HSFY1Q96LI6 401 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 TMEM175Q9BSA9 504 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 COLEC11Q9BWP8 271 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.12■■□□□ 1.13
TPM1-208ENST00000404484 TIMM13Q9Y5L4 95 aaPredicted RBP22.12■■□□□ 1.13
TPM1-208ENST00000404484 COL4A6Q14031 1691 aa22.12■■□□□ 1.13
TPM1-208ENST00000404484 GOLGA8SH3BPF8 625 aa22.11■■□□□ 1.13
TPM1-208ENST00000404484 PIGHQ14442 188 aaPredicted RBP22.11■■□□□ 1.13
TPM1-208ENST00000404484 MAPRE1Q15691 268 aaKnown RBP22.11■■□□□ 1.13
TPM1-208ENST00000404484 MDH1BQ5I0G3 518 aa22.11■■□□□ 1.13
TPM1-208ENST00000404484 OVOS1Q6IE37 1185 aa22.11■■□□□ 1.13
TPM1-208ENST00000404484 TMEM110Q86TL2 294 aa22.11■■□□□ 1.13
TPM1-208ENST00000404484 FUKQ8N0W3 1084 aa22.11■■□□□ 1.13
TPM1-208ENST00000404484 LRRC43Q8N309 656 aa22.11■■□□□ 1.13
TPM1-208ENST00000404484 LRRN4CLQ8ND94 238 aa22.11■■□□□ 1.13
TPM1-208ENST00000404484 ACTRT1Q8TDG2 376 aa22.11■■□□□ 1.13
TPM1-208ENST00000404484 HASPINQ8TF76 798 aa22.11■■□□□ 1.13
TPM1-208ENST00000404484 CLP1Q92989 425 aaKnown RBP22.11■■□□□ 1.13
TPM1-208ENST00000404484 MED10Q9BTT4 135 aa22.11■■□□□ 1.13
TPM1-208ENST00000404484 PLVAPQ9BX97 442 aa22.11■■□□□ 1.13
TPM1-208ENST00000404484 PCDHA3Q9Y5H8 950 aa22.11■■□□□ 1.13
TPM1-208ENST00000404484 MRPL42Q9Y6G3 142 aaKnown RBP22.11■■□□□ 1.13
TPM1-208ENST00000404484 TSC2P49815 1807 aa22.11■■□□□ 1.13
TPM1-208ENST00000404484 TBKBP1A7MCY6 615 aa22.1■■□□□ 1.13
TPM1-208ENST00000404484 I3L4J1 428 aa22.1■■□□□ 1.13
TPM1-208ENST00000404484 XPO1O14980 1071 aaKnown RBP22.1■■□□□ 1.13
TPM1-208ENST00000404484 CEP104O60308 925 aa22.1■■□□□ 1.13
TPM1-208ENST00000404484 TADA2AO75478 443 aa22.1■■□□□ 1.13
TPM1-208ENST00000404484 PLA2G4AP47712 749 aa22.1■■□□□ 1.13
TPM1-208ENST00000404484 RSRC2Q7L4I2 434 aaKnown RBP22.1■■□□□ 1.13
TPM1-208ENST00000404484 NIPA2Q8N8Q9 360 aa22.1■■□□□ 1.13
TPM1-208ENST00000404484 FBXO22Q8NEZ5 403 aa22.1■■□□□ 1.13
TPM1-208ENST00000404484 MYCBPAPQ8TBZ2 947 aa22.1■■□□□ 1.13
TPM1-208ENST00000404484 GDPD5Q8WTR4 605 aa22.1■■□□□ 1.13
TPM1-208ENST00000404484 NAP1L3Q99457 506 aaPredicted RBP22.1■■□□□ 1.13
TPM1-208ENST00000404484 DUSP16Q9BY84 665 aa22.1■■□□□ 1.13
TPM1-208ENST00000404484 TRIM7Q9C029 511 aa22.1■■□□□ 1.13
TPM1-208ENST00000404484 NRDE2Q9H7Z3 1164 aa22.1■■□□□ 1.13
TPM1-208ENST00000404484 TTC7AQ9ULT0 858 aaPredicted RBP22.1■■□□□ 1.13
TPM1-208ENST00000404484 E5RJQ4 531 aa22.09■■□□□ 1.13
TPM1-208ENST00000404484 PGRMC1O00264 195 aaKnown RBP22.09■■□□□ 1.13
TPM1-208ENST00000404484 SYN3O14994 580 aa22.09■■□□□ 1.13
TPM1-208ENST00000404484 B4GALT3O60512 393 aa22.09■■□□□ 1.13
TPM1-208ENST00000404484 ALDH2P05091 517 aa22.09■■□□□ 1.13
TPM1-208ENST00000404484 FAM200BP0CF97 657 aa22.09■■□□□ 1.13
TPM1-208ENST00000404484 NPR3P17342 541 aa22.09■■□□□ 1.13
TPM1-208ENST00000404484 BMPR1AP36894 532 aa22.09■■□□□ 1.13
TPM1-208ENST00000404484 RPL7AP62424 266 aaKnown RBP22.09■■□□□ 1.13
TPM1-208ENST00000404484 TSPY1Q01534 308 aa22.09■■□□□ 1.13
TPM1-208ENST00000404484 TEX35Q5T0J7 233 aa22.09■■□□□ 1.13
TPM1-208ENST00000404484 FAM102AQ5T9C2 384 aaPredicted RBP22.09■■□□□ 1.13
TPM1-208ENST00000404484 OR6B2Q6IFH4 312 aa22.09■■□□□ 1.13
TPM1-208ENST00000404484 PMF1Q6P1K2 205 aa22.09■■□□□ 1.13
TPM1-208ENST00000404484 RASGEF1CQ8N431 466 aa22.09■■□□□ 1.13
TPM1-208ENST00000404484 MAFAQ8NHW3 353 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms