RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 RC3H1Q5TC82 1133 aaKnown RBP10□□□□□ -0.81
SMC1B-202ENST00000404354 C6orf163Q5TEZ5 329 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 OLFML2BQ68BL8 750 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 ECSITQ9BQ95 431 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 TLE6Q9H808 572 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 PARVAQ9NVD7 372 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 SEPT9Q9UHD8 586 aaPredicted RBP10□□□□□ -0.81
SMC1B-202ENST00000404354 SLC24A2Q9UI40 661 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 EXOC7Q9UPT5 735 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 MTO1Q9Y2Z2 717 aaKnown RBP10□□□□□ -0.81
SMC1B-202ENST00000404354 ZNF541Q9H0D2 1346 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 MYH9P35579 1960 aaKnown RBP10□□□□□ -0.81
SMC1B-202ENST00000404354 ADAMTSL1Q8N6G6 1762 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 NHSQ6T4R5 1651 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 hCG_1818297A0A087WSY0 165 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10□□□□□ -0.81
SMC1B-202ENST00000404354 ANKRD33BA6NCL7 494 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 LRRIQ4A6NIV6 560 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 SPECC1L-ADORA2AF8WAN1 911 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 CST3P01034 146 aaPredicted RBP10□□□□□ -0.81
SMC1B-202ENST00000404354 PSMA2P25787 234 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 IL1R2P27930 398 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 TBC1D25Q3MII6 688 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 SFT2D3Q587I9 215 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 TFDP3Q5H9I0 405 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 VWA5B1Q5TIE3 1220 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 BSPRYQ5W0U4 402 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 SWSAP1Q6NVH7 229 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 HHIPL2Q6UWX4 724 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 OGFOD1Q8N543 542 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 JOSD2Q8TAC2 188 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 IFT43Q96FT9 208 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 RBM41Q96IZ5 413 aaKnown RBP10□□□□□ -0.81
SMC1B-202ENST00000404354 ANKRD27Q96NW4 1050 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 AVENQ9NQS1 362 aaPredicted RBP10□□□□□ -0.81
SMC1B-202ENST00000404354 KCND2Q9NZV8 630 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 NXF1Q9UBU9 619 aaKnown RBP10□□□□□ -0.81
SMC1B-202ENST00000404354 HEY1Q9Y5J3 304 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 RBP3P10745 1247 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 PDE1BQ01064 536 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 DLG1Q12959 904 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 CUL2Q13617 745 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 OASLQ15646 514 aaKnown RBP9.99□□□□□ -0.81
SMC1B-202ENST00000404354 CRY2Q49AN0 593 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 GPAT2Q6NUI2 795 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 TATDN1Q6P1N9 297 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 ADGRD1Q6QNK2 874 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 NUDCD3Q8IVD9 361 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 UNC5BQ8IZJ1 945 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 CEP120Q8N960 986 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 MOCOSQ96EN8 888 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 FAM81BQ96LP2 452 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 GCNAQ96QF7 691 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 TARS2Q9BW92 718 aaKnown RBP9.99□□□□□ -0.81
SMC1B-202ENST00000404354 ACSS3Q9H6R3 686 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 SLC9A2Q9UBY0 812 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 KIF13BQ9NQT8 1826 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 COL16A1Q07092 1604 aaPredicted RBP9.99□□□□□ -0.81
SMC1B-202ENST00000404354 HNRNPRO43390 633 aaKnown RBP9.99□□□□□ -0.81
SMC1B-202ENST00000404354 VNN1O95497 513 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 PEX2P28328 305 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 CDKN2BP42772 138 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 AQP4P55087 323 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 EIF3EP60228 445 aaKnown RBP9.99□□□□□ -0.81
SMC1B-202ENST00000404354 ZNF200P98182 395 aaPredicted RBP9.99□□□□□ -0.81
SMC1B-202ENST00000404354 PRKD1Q15139 912 aaPredicted RBP9.99□□□□□ -0.81
SMC1B-202ENST00000404354 TRIP10Q15642 601 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 SH3PXD2AQ5TCZ1 1133 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 DARS2Q6PI48 645 aaKnown RBP9.99□□□□□ -0.81
SMC1B-202ENST00000404354 TDRPQ86YL5 185 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 PPIL6Q8IXY8 311 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 RNF148Q8N7C7 305 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 GMCL1P1Q8NEA9 526 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 VTI1AQ96AJ9 217 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 PHACTR1Q9C0D0 580 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 TMX4Q9H1E5 349 aaPredicted RBP9.99□□□□□ -0.81
SMC1B-202ENST00000404354 VPS11Q9H270 941 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 PREBQ9HCU5 417 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 IL1RAPL1Q9NZN1 696 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 IP6K2Q9UHH9 426 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 ANGPTL2Q9UKU9 493 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 ZNRF3Q9ULT6 936 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 PCDHGB4Q9UN71 923 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 MAGED2Q9UNF1 606 aaPredicted RBP9.99□□□□□ -0.81
SMC1B-202ENST00000404354 COQ4Q9Y3A0 265 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 PCDHGB5Q9Y5G0 923 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 NCF2P19878 526 aaPredicted RBP9.99□□□□□ -0.81
SMC1B-202ENST00000404354 RABGAP1LQ5R372 815 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 KIAA0319LQ8IZA0 1049 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 KCTD6Q8NC69 237 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 SPATA18Q8TC71 538 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 AGO4Q9HCK5 861 aaKnown RBP9.99□□□□□ -0.81
SMC1B-202ENST00000404354 PICK1Q9NRD5 415 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 RAB6BQ9NRW1 208 aa9.99□□□□□ -0.81
SMC1B-202ENST00000404354 TMEM191CA6NGB0 347 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 H7C0C1 242 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 PLSCR1O15162 318 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 CSDE1O75534 798 aaKnown RBP9.98□□□□□ -0.81
SMC1B-202ENST00000404354 ITGBL1O95965 494 aaPredicted RBP9.98□□□□□ -0.81
SMC1B-202ENST00000404354 PROCP04070 461 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms