RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 E7ENX8 843 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 RAB27BO00194 218 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 CYP2C9P11712 490 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 PXNP49023 591 aaPredicted RBP5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 ITGA8P53708 1063 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 LOXL3P58215 753 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 KRTAP10-2P60368 255 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 TAP2Q03519 686 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 KRT17Q04695 432 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 SCAPQ12770 1279 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 TUBA3CQ13748 450 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 MORC3Q14149 939 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 RBM20Q5T481 1227 aaKnown RBP5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 TUBA3EQ6PEY2 450 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 MICALCLQ6ZW33 695 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 RNF44Q7L0R7 432 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 GPR149Q86SP6 731 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 ASB10Q8WXI3 467 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 MOGAT1Q96PD6 335 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 MLST8Q9BVC4 326 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 VPS11Q9H270 941 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 ZNF212Q9UDV6 495 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 FZD1Q9UP38 647 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 SHOC2Q9UQ13 582 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 REXO2Q9Y3B8 237 aaKnown RBP5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 PAXBP1Q9Y5B6 917 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 AGLP35573 1532 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 CLSPNQ9HAW4 1339 aa5.97□□□□□ -1.45
HMGB3P19-201ENST00000403971 ATP10AO60312 1499 aa5.96□□□□□ -1.45
HMGB3P19-201ENST00000403971 FAM135AQ9P2D6 1515 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 ABHD14A-ACY1A0A1B0GW23 586 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 C1QTNF3-AMACRE9PGA6 284 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 FOSP01100 380 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 SETSIPP0DME0 302 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 XRCC6P12956 609 aaKnown RBP eCLIP5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 GUCY1B3Q02153 619 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 HLXQ14774 488 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 ARL13BQ3SXY8 428 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 ARHGAP40Q5TG30 622 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 SP5Q6BEB4 398 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 C1orf228Q6PIY5 440 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 RHOUQ7L0Q8 258 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 SLC30A5Q8TAD4 765 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 LRRC46Q96FV0 321 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 GPR20Q99678 358 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 ARPC5LQ9BPX5 153 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 COLEC11Q9BWP8 271 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 CXorf36Q9H7Y0 433 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 PLCB1Q9NQ66 1216 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 SERHLQ9NQF3 203 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 MYO1AQ9UBC5 1043 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 PADI4Q9UM07 663 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 MROH1Q8NDA8 1641 aa5.96□□□□□ -1.46
HMGB3P19-201ENST00000403971 PRDM15P57071 1507 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 ZC3H13Q5T200 1668 aaKnown RBP5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 A0A0B4J269 797 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 LOC102723971A0A1B0GUV8 181 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 B8ZZF3 427 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 SOAT2O75908 522 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 FGF18O76093 207 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 BTF3P20290 206 aaKnown RBP5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 ACVR2AP27037 513 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 CD6P30203 668 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 IL6STP40189 918 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 MAPK10P53779 464 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 SP2Q02086 613 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 MYO1EQ12965 1108 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 TUBB3Q13509 450 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 SLC29A2Q14542 456 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 SLC35G1Q2M3R5 365 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 PTCHD3Q3KNS1 767 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 LSM12Q3MHD2 195 aaKnown RBP5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 MGAT5BQ3V5L5 792 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 MIIPQ5JXC2 388 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 IGFL4Q6B9Z1 124 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 TSHZ1Q6ZSZ6 1077 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 MRGPREQ86SM8 312 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 COLGALT2Q8IYK4 626 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 SYNE4Q8N205 404 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 VWDEQ8N2E2 1590 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 TXLNBQ8N3L3 684 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 BPIFB1Q8TDL5 484 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 SSH3Q8TE77 659 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 HAS1Q92839 578 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 LENG9Q96B70 501 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 PPP1R9BQ96SB3 815 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 PTDSS2Q9BVG9 487 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 INTS13Q9NVM9 706 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 SERTAD3Q9UJW9 196 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 YEATS2Q9ULM3 1422 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 NDRG4Q9ULP0 352 aaKnown RBP5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 HS3ST4Q9Y661 456 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 SPATA31A3Q5VYP0 1347 aa5.95□□□□□ -1.46
HMGB3P19-201ENST00000403971 TET3O43151 1660 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 DHX57Q6P158 1386 aaKnown RBP5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 CFAP65Q6ZU64 1925 aaKnown RBP5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 A0A087WZ62 844 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 THAP12O43422 761 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 PEX11BO96011 259 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 A1BGP04217 495 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms