RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 VEGFAP15692 232 aaPredicted RBP2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 ITGALP20701 1170 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 ZFP36P26651 326 aaKnown RBP2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 ACVR2AP27037 513 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 GCLCP48506 637 aaPredicted RBP2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 VAV2P52735 878 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 ZNF134P52741 427 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 WNT3P56703 355 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 LILRA4P59901 499 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 MC2RQ01718 297 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 ARHGEF7Q14155 803 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 TAF5Q15542 800 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 NPY5RQ15761 445 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 TIGD6Q17RP2 521 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 GEN1Q17RS7 908 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 CD300EQ496F6 205 aaPredicted RBP2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 LY6G5CQ5SRR4 150 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 TMTC4Q5T4D3 741 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 RAP1GAP2Q684P5 730 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 FCRL6Q6DN72 434 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 JMJD6Q6NYC1 403 aaPredicted RBP2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 KCNV1Q6PIU1 500 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 CRTC1Q6UUV9 634 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 MICALCLQ6ZW33 695 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 RHOUQ7L0Q8 258 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 MRGPREQ86SM8 312 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 ARHGEF19Q8IW93 802 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 YAF2Q8IY57 180 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 CCDC150Q8NCX0 1101 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 PROKR1Q8TCW9 393 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 SNX19Q92543 992 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 FUBP1Q96AE4 644 aaKnown RBP2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 TMEM125Q96AQ2 219 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 NELL2Q99435 816 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 ADAM2Q99965 735 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 MESP1Q9BRJ9 268 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 ZNF747Q9BV97 191 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 MAGEB5Q9BZ81 275 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 UNKLQ9H9P5 680 aaKnown RBP2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 HEYLQ9NQ87 328 aaPredicted RBP2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 TM7SF3Q9NS93 570 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 INTS13Q9NVM9 706 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 TBCCD1Q9NVR7 557 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 ZSCAN32Q9NX65 697 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 DACT1Q9NYF0 836 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 PNMA2Q9UL42 364 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 ZMYND8Q9ULU4 1186 aaPredicted RBP2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 SHOC2Q9UQ13 582 aa2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 MRPS17Q9Y2R5 130 aaKnown RBP2.88□□□□□ -1.95
CBX3P9-201ENST00000402326 POLR2AP24928 1970 aaKnown RBP2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 A0A0B4J269 797 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 CENPVL1A0A0U1RR11 272 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 LOC102723971A0A1B0GUV8 181 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 PIPSLA2A3N6 862 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 M0R3H8 397 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 IPO5O00410 1097 aaKnown RBP2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 LPXNO60711 386 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 GYS1P13807 737 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 PECAM1P16284 738 aaPredicted RBP2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 TPH1P17752 444 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 MAKP20794 623 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 GATA3P23771 443 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 ATICP31939 592 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 SERPINF1P36955 418 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 MAPK9P45984 424 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 NPTX2P47972 431 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 PTDSS1P48651 473 aaKnown RBP2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 PXNP49023 591 aaPredicted RBP2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 NDUFV1P49821 464 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 CPT1AP50416 773 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 LOXL3P58215 753 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 KRT17Q04695 432 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 TUBB3Q13509 450 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 TP53BP2Q13625 1128 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 PRKG1Q13976 671 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 PTK2BQ14289 1009 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 PUM1Q14671 1186 aaKnown RBP eCLIP2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 PTPAQ15257 358 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 PTCHD3Q3KNS1 767 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 MGAT5BQ3V5L5 792 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 ABHD17BQ5VST6 288 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 FNDC7Q5VTL7 733 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 CACHD1Q5VU97 1274 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 PLAG1Q6DJT9 500 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 SFRP4Q6FHJ7 346 aaPredicted RBP2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 KIAA0408Q6ZU52 694 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 KRT28Q7Z3Y7 464 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 GAS2L3Q86XJ1 694 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 ADGRG5Q8IZF4 528 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 FAM9AQ8IZU1 332 aaPredicted RBP2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 PAF1Q8N7H5 531 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 OR1N1Q8NGS0 311 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 CYP2W1Q8TAV3 490 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 FAM71BQ8TC56 605 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 TRAPPC12Q8WVT3 735 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 IPCEF1Q8WWN9 437 aaPredicted RBP2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 TRIM63Q969Q1 353 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 PTCD3Q96EY7 689 aaKnown RBP2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 SNX27Q96L92 541 aa2.87□□□□□ -1.95
CBX3P9-201ENST00000402326 PPP1R9BQ96SB3 815 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms