RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 GKN1Q9NS71 199 aa16.88■□□□□ 0.29
ATG4B-203ENST00000400772 RMND1Q9NWS8 449 aa16.88■□□□□ 0.29
ATG4B-203ENST00000400772 HMGXB4Q9UGU5 601 aa16.88■□□□□ 0.29
ATG4B-203ENST00000400772 ANAPC1Q9H1A4 1944 aa16.88■□□□□ 0.29
ATG4B-203ENST00000400772 VPS13AQ96RL7 3174 aa16.87■□□□□ 0.29
ATG4B-203ENST00000400772 PRR23AA6NEV1 266 aa16.87■□□□□ 0.29
ATG4B-203ENST00000400772 SPECC1L-ADORA2AF8WAN1 911 aa16.87■□□□□ 0.29
ATG4B-203ENST00000400772 KRT13P13646 458 aa16.87■□□□□ 0.29
ATG4B-203ENST00000400772 CTHP32929 405 aa16.87■□□□□ 0.29
ATG4B-203ENST00000400772 PIK3CAP42336 1068 aa16.87■□□□□ 0.29
ATG4B-203ENST00000400772 MTAPQ13126 283 aa16.87■□□□□ 0.29
ATG4B-203ENST00000400772 ORC1Q13415 861 aa16.87■□□□□ 0.29
ATG4B-203ENST00000400772 TRIM68Q6AZZ1 485 aa16.87■□□□□ 0.29
ATG4B-203ENST00000400772 ACOT1Q86TX2 421 aa16.87■□□□□ 0.29
ATG4B-203ENST00000400772 ELOA2Q8IYF1 753 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-203ENST00000400772 CRYBG2Q8N1P7 616 aa16.87■□□□□ 0.29
ATG4B-203ENST00000400772 ARL14EPQ8N8R7 260 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-203ENST00000400772 CHFRQ96EP1 664 aa16.87■□□□□ 0.29
ATG4B-203ENST00000400772 MSANTD3Q96H12 275 aa16.87■□□□□ 0.29
ATG4B-203ENST00000400772 KCNK16Q96T55 309 aa16.87■□□□□ 0.29
ATG4B-203ENST00000400772 CHRDQ9H2X0 955 aa16.87■□□□□ 0.29
ATG4B-203ENST00000400772 KIF9Q9HAQ2 790 aa16.87■□□□□ 0.29
ATG4B-203ENST00000400772 THG1LQ9NWX6 298 aaKnown RBP16.87■□□□□ 0.29
ATG4B-203ENST00000400772 R4GN57 208 aa16.87■□□□□ 0.29
ATG4B-203ENST00000400772 KIF26AQ9ULI4 1882 aaPredicted RBP16.86■□□□□ 0.29
ATG4B-203ENST00000400772 TRAV19A0A0A6YYK7 116 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 ZNF840PA6NDX5 716 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 LAMTOR5O43504 91 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 GADD45BO75293 160 aaPredicted RBP16.86■□□□□ 0.29
ATG4B-203ENST00000400772 CLSTN1O94985 981 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 SMC2O95347 1197 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 USP17L7P0C7H9 530 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 P4HA1P13674 534 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 NDST1P52848 882 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 ZXDBP98169 803 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 GAS6Q14393 721 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 ZNF77Q15935 545 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 ZNF528Q3MIS6 628 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 ANKRD40Q6AI12 368 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 FAM35AQ86V20 835 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 RALGPS2Q86X27 583 aaPredicted RBP16.86■□□□□ 0.29
ATG4B-203ENST00000400772 ZC3H3Q8IXZ2 948 aaKnown RBP16.86■□□□□ 0.29
ATG4B-203ENST00000400772 FUKQ8N0W3 1084 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 ADSSL1Q8N142 457 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 SEMA4DQ92854 862 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 NKD2Q969F2 451 aaPredicted RBP16.86■□□□□ 0.29
ATG4B-203ENST00000400772 SMARCE1Q969G3 411 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 TNIP3Q96KP6 325 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 TWNKQ96RR1 684 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 MMRN2Q9H8L6 949 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 TMEM8AQ9HCN3 771 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 FBXO4Q9UKT5 387 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 PATJQ8NI35 1801 aa16.86■□□□□ 0.29
ATG4B-203ENST00000400772 ZNF638Q14966 1978 aaKnown RBP16.86■□□□□ 0.29
ATG4B-203ENST00000400772 TNFRSF10BO14763 440 aa16.85■□□□□ 0.29
ATG4B-203ENST00000400772 CETN3O15182 167 aa16.85■□□□□ 0.29
ATG4B-203ENST00000400772 ARSAP15289 507 aa16.85■□□□□ 0.29
ATG4B-203ENST00000400772 HDCP19113 662 aa16.85■□□□□ 0.29
ATG4B-203ENST00000400772 GTF2H1P32780 548 aa16.85■□□□□ 0.29
ATG4B-203ENST00000400772 CSTF1Q05048 431 aaKnown RBP16.85■□□□□ 0.29
ATG4B-203ENST00000400772 TAF10Q12962 218 aa16.85■□□□□ 0.29
ATG4B-203ENST00000400772 RUNX3Q13761 415 aa16.85■□□□□ 0.29
ATG4B-203ENST00000400772 ITPRIPL2Q3MIP1 535 aa16.85■□□□□ 0.29
ATG4B-203ENST00000400772 C1orf228Q6PIY5 440 aa16.85■□□□□ 0.29
ATG4B-203ENST00000400772 MAMSTRQ6ZN01 415 aa16.85■□□□□ 0.29
ATG4B-203ENST00000400772 UNC93AQ86WB7 457 aa16.85■□□□□ 0.29
ATG4B-203ENST00000400772 NUP93Q8N1F7 819 aa16.85■□□□□ 0.29
ATG4B-203ENST00000400772 ZMIZ2Q8NF64 920 aa16.85■□□□□ 0.29
ATG4B-203ENST00000400772 EBF3Q9H4W6 596 aa16.85■□□□□ 0.29
ATG4B-203ENST00000400772 PRMT8Q9NR22 394 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-203ENST00000400772 RBM12Q9NTZ6 932 aaKnown RBP16.85■□□□□ 0.29
ATG4B-203ENST00000400772 TRPM5Q9NZQ8 1165 aa16.85■□□□□ 0.29
ATG4B-203ENST00000400772 TRIM49BA6NDI0 452 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 BEST1O76090 585 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 CKMP06732 381 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 CCDC130P13994 396 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 TCF3P15923 654 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 PFKLP17858 780 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 PPP3CCP48454 512 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 INCA1Q0VD86 236 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 USP4Q13107 963 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 MTF1Q14872 753 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 PON2Q15165 354 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 KRT39Q6A163 491 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 ISM2Q6H9L7 571 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 TSSK4Q6SA08 328 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 C12orf29Q8N999 325 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 SCAMP5Q8TAC9 235 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 WHAMMQ8TF30 809 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 NELL1Q92832 810 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 SMOQ99835 787 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 MED10Q9BTT4 135 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 RNF38Q9H0F5 515 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 IL37Q9NZH6 218 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 EHD2Q9NZN4 543 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 MAN1B1Q9UKM7 699 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 CIZ1Q9ULV3 898 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-203ENST00000400772 ARHGAP26Q9UNA1 814 aa16.84■□□□□ 0.29
ATG4B-203ENST00000400772 OLFM2O95897 454 aa16.83■□□□□ 0.28
ATG4B-203ENST00000400772 EPB41P11171 864 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms