RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 VCPKMTQ9H867 229 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 EXOSC4Q9NPD3 245 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 DNAJC11Q9NVH1 559 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 APOBEC2Q9Y235 224 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 ENTPD3O75355 529 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 ANXA11P50995 505 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 CORO7P57737 925 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 DMPKQ09013 629 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 USP50Q70EL3 339 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 SETD3Q86TU7 594 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 NDST4Q9H3R1 872 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 SYBUQ9NX95 663 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 WBP11Q9Y2W2 641 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 DAGLAQ9Y4D2 1042 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 CCR4P51679 360 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 GPC5P78333 572 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 COASYQ13057 564 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 EPHA7Q15375 998 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 CXorf40AQ8TE69 158 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 ZNF558Q96NG5 402 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 C17orf80Q9BSJ5 609 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 MAN1B1Q9UKM7 699 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 LRCH1Q9Y2L9 728 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 GLI2P10070 1586 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 EIF3EP60228 445 aaKnown RBP11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 ACTR2P61160 394 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 GPS1Q13098 491 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 STILQ15468 1287 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 TPGS1Q6ZTW0 290 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 PDGFDQ9GZP0 370 aaPredicted RBP11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 ADAMTS1Q9UHI8 967 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 RWDD2AQ9UIY3 292 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 PPP2R3BQ9Y5P8 575 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 SPATA31A1Q5TZJ5 1347 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 E2F8A0AVK6 867 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 TMEM191CA6NGB0 347 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 SLC2A3P11169 496 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 PSEN2P49810 448 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 UGT3A1Q6NUS8 523 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 UTS2BQ765I0 119 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 DNAJB3Q8WWF6 145 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 SERAC1Q96JX3 654 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 PBKQ96KB5 322 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 MTA3Q9BTC8 594 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 TMEM51Q9NW97 253 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 NCDNQ9UBB6 729 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 DSEQ9UL01 958 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 SPATA2Q9UM82 520 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 A0A0G2JND7 137 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 SMIM22K7EJ46 135 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 DGAT1O75907 488 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 ITGB3P05106 788 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 TYK2P29597 1187 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 ALDH9A1P49189 494 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 ALKBH5Q6P6C2 394 aaKnown RBP11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 RHOT2Q8IXI1 618 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 C18orf8Q96DM3 657 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 BTBD6Q96KE9 485 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 AIFM3Q96NN9 605 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 GINS4Q9BRT9 223 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 RNF103-CHMP3A0A140T963 221 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 HS6ST1O60243 411 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 IL1R1P14778 569 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 ZNF24P17028 368 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 PTPN3P26045 913 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 ELAVL2Q12926 359 aaKnown RBP11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 NCOA4Q13772 614 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 LRRC36Q1X8D7 754 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 MIER2Q8N344 545 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 HPDLQ96IR7 371 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 MYOCQ99972 504 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 THTPAQ9BU02 230 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 ADI1Q9BV57 179 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 DCP1AQ9NPI6 582 aaPredicted RBP11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 PADI4Q9UM07 663 aa11.37□□□□□ -0.59
CACNA1C-216ENST00000399638 EMSYQ7Z589 1322 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 CSF1RP07333 972 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 PDHA2P29803 388 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 SERPINB4P48594 390 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 POM121L1PQ3SYA9 428 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 PRPF18Q99633 342 aaKnown RBP11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 KIFC1Q9BW19 673 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 TRIM39Q9HCM9 518 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 NMRK1Q9NWW6 199 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 UXTQ9UBK9 157 aaPredicted RBP11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 NEXMIFQ5QGS0 1516 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 AREL1O15033 823 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 RPLP2P05387 115 aaKnown RBP11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 PSMC6P62333 389 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 TAP1Q03518 808 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 LRRC63Q05C16 580 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 NFRKBQ6P4R8 1299 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 CCDC81Q6ZN84 652 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 PITPNM2Q9BZ72 1349 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 NPHP3-ACAD11A0A0J9YXS1 232 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 MFAP3LO75121 409 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 EIF2S1P05198 315 aaKnown RBP11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 PDGFRAP16234 1089 aa11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 STIP1P31948 543 aaKnown RBP11.36□□□□□ -0.59
CACNA1C-216ENST00000399638 ARL6IP4Q66PJ3 421 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms