RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 DMAC2Q9NW81 257 aa12.61□□□□□ -0.39
SMIM11A-201ENST00000399292 GTF3C4Q9UKN8 822 aa12.61□□□□□ -0.39
SMIM11A-201ENST00000399292 CALUO43852 315 aaPredicted RBP12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 PHACTR2O75167 634 aa12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 ACAT1P24752 427 aaKnown RBP12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 GABRR2P28476 465 aa12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 AP3M2P53677 418 aa12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 SNW1Q13573 536 aaKnown RBP12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 KCNB1Q14721 858 aa12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 DBN1Q16643 649 aa12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 SLC44A4Q53GD3 710 aa12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 CWF19L1Q69YN2 538 aaKnown RBP12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 PHLDB3Q6NSJ2 640 aa12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 RIPOR1Q6ZS17 1223 aa12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 LIMS2Q7Z4I7 341 aa12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 OSTM1Q86WC4 334 aa12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 TMC8Q8IU68 726 aa12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 ZSCAN18Q8TBC5 510 aaPredicted RBP12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 E2F7Q96AV8 911 aa12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 LPIN3Q9BQK8 851 aa12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 PI4K2AQ9BTU6 479 aa12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 PLA2G2FQ9BZM2 168 aa12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 TMLHEQ9NVH6 421 aa12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 ZDBF2Q9HCK1 2354 aa12.6□□□□□ -0.39
SMIM11A-201ENST00000399292 NR3C1P04150 777 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 FAM163BP0C2L3 166 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 ATF6P18850 670 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 FCARP24071 287 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 LMO2P25791 158 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 ATICP31939 592 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 GNL1P36915 607 aaPredicted RBP12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 CASP4P49662 377 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 MARSP56192 900 aaKnown RBP12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 STARD6P59095 220 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 RPL10AP62906 217 aaKnown RBP12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 CLDN10P78369 228 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 PRKCQQ04759 706 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 TCF15Q12870 199 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 WDR72Q3MJ13 1102 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 ARHGAP15Q53QZ3 475 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 FOXR1Q6PIV2 292 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 GAREM2Q75VX8 874 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 SPATA2LQ8IUW3 424 aaPredicted RBP12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 FMR1NBQ8N0W7 255 aaPredicted RBP12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 PARD3BQ8TEW8 1205 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 TRMT61BQ9BVS5 477 aaKnown RBP12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 GZF1Q9H116 711 aaPredicted RBP12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 TBC1D17Q9HA65 648 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 TRPV4Q9HBA0 871 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 ZNF334Q9HCZ1 680 aaPredicted RBP12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 ABCB6Q9NP58 842 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 CDH9Q9ULB4 789 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 MAPK8IP1Q9UQF2 711 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 TRAF3IP3Q9Y228 551 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 FRMD4BQ9Y2L6 1034 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 SIT1Q9Y3P8 196 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 ANK1P16157 1881 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 SCN1AP35498 2009 aa12.59□□□□□ -0.39
SMIM11A-201ENST00000399292 MYBPHLA2RUH7 354 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 LRRIQ3A6PVS8 624 aaPredicted RBP12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 TACC1O75410 805 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 CELA2BP08218 269 aaPredicted RBP12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 PDGFRBP09619 1106 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 PSMC3P17980 439 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 WARSP23381 471 aaKnown RBP12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 CYP2F1P24903 491 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 RPL13P26373 211 aaKnown RBP12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 CDC25CP30307 473 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 VIPR2P41587 438 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 MYL6P60660 151 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 TNNC1P63316 161 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 BIRC3Q13489 604 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 WDR44Q5JSH3 913 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 GPR158Q5T848 1215 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 CEP135Q66GS9 1140 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 FAM171BQ6P995 826 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 C4orf50Q6ZRC1 276 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 MFSD6LQ8IWD5 586 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 GUF1Q8N442 669 aaKnown RBP12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 PLEKHO2Q8TD55 490 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 DEPDC1BQ8WUY9 529 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 KBTBD7Q8WVZ9 684 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 SYAP1Q96A49 352 aaPredicted RBP12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 DOCK6Q96HP0 2047 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 FUBP3Q96I24 572 aaKnown RBP eCLIP12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 GCNAQ96QF7 691 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 SNX25Q9H3E2 840 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 BRD9Q9H8M2 597 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 MAGEC2Q9UBF1 373 aaPredicted RBP12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 DOCK8Q8NF50 2099 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 VPS13AQ96RL7 3174 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 WDR87Q6ZQQ6 2873 aa12.58□□□□□ -0.4
SMIM11A-201ENST00000399292 NOTCH4Q99466 2003 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 ZNF318Q5VUA4 2279 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 HEPACAM2A8MVW5 462 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 H0Y858 1186 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 ATP2C2O75185 946 aa12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 STAU1O95793 577 aaKnown RBP12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 C4BPAP04003 597 aaKnown RBP12.57□□□□□ -0.4
SMIM11A-201ENST00000399292 CSH1P0DML2 217 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms