RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 LIMA1Q9UHB6 759 aaKnown RBP9.7□□□□□ -0.86
ATL3-201ENST00000398868 DAPK2Q9UIK4 370 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 A0A087WZ62 844 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.69□□□□□ -0.86
ATL3-201ENST00000398868 MFN2O95140 757 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 ZNF177Q13360 481 aaPredicted RBP9.69□□□□□ -0.86
ATL3-201ENST00000398868 ARL6IP4Q66PJ3 421 aaKnown RBP9.69□□□□□ -0.86
ATL3-201ENST00000398868 PPP4R3CPQ6ZMV5 832 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 CNDP1Q96KN2 507 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 FDXACB1Q9BRP7 624 aaPredicted RBP9.69□□□□□ -0.86
ATL3-201ENST00000398868 SNX8Q9Y5X2 465 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 ARHGEF12Q9NZN5 1544 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 NRKQ7Z2Y5 1582 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 NT5C1B-RDH14C9J2C7 533 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 PYGMP11217 842 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 EPHA7Q15375 998 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 PGS1Q32NB8 556 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 FAM171A1Q5VUB5 890 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 FHOD1Q9Y613 1164 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 SLC12A8A0AV02 714 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 C19orf81C9J6K1 198 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 ZNF197O14709 1029 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 ZNF263O14978 683 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 RASA1P20936 1047 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 ABCD1P33897 745 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 COL9A2Q14055 689 aaPredicted RBP9.69□□□□□ -0.86
ATL3-201ENST00000398868 NANOGNBQ7Z5D8 188 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 HORMAD1Q86X24 394 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 EXD1Q8NHP7 514 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 SPATA18Q8TC71 538 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 ZFP42Q96MM3 310 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 C10orf88Q9H8K7 445 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 DDI2Q5TDH0 399 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 TRIM69Q86WT6 500 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 RHOT1Q8IXI2 618 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 STX19Q8N4C7 294 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 CATSPER1Q8NEC5 780 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 AHCYL2Q96HN2 611 aaKnown RBP9.69□□□□□ -0.86
ATL3-201ENST00000398868 MXRA8Q9BRK3 442 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 SEPT3Q9UH03 358 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 VPS28Q9UK41 221 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 CCT8L1PA6NM43 557 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 LGALS16A8MUM7 142 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 PEX10O60683 326 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 EYA4O95677 639 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 IRAK1P51617 712 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 PPP1R14AQ96A00 147 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 EMID1Q96A84 441 aaPredicted RBP9.69□□□□□ -0.86
ATL3-201ENST00000398868 RUSC1Q9BVN2 902 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 MRPL1Q9BYD6 325 aaKnown RBP9.69□□□□□ -0.86
ATL3-201ENST00000398868 NSMCE4AQ9NXX6 385 aa9.69□□□□□ -0.86
ATL3-201ENST00000398868 DDTLA6NHG4 134 aaPredicted RBP9.68□□□□□ -0.86
ATL3-201ENST00000398868 MAP3K10Q02779 954 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 RUNX1T1Q06455 604 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 TRIP4Q15650 581 aaPredicted RBP9.68□□□□□ -0.86
ATL3-201ENST00000398868 GPR141Q7Z602 305 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 ASAP3Q8TDY4 903 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 QRICH2Q9H0J4 1663 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 STRNO43815 780 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 HSMCR30P0CW71 290 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 TRIM32Q13049 653 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 DNAJC3Q13217 504 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 OOSP2Q86WS3 158 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 UBASH3BQ8TF42 649 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 DCUN1D5Q9BTE7 237 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 TRIM39Q9HCM9 518 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 EPB41L4AQ9HCS5 686 aaPredicted RBP9.68□□□□□ -0.86
ATL3-201ENST00000398868 FAM153AQ9UHL3 310 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 C1orf232A0A0U1RR37 186 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 GSNP06396 782 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 ODC1P11926 461 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 TCEA1P23193 301 aaKnown RBP9.68□□□□□ -0.86
ATL3-201ENST00000398868 SERPINB5P36952 375 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 ADCYAP1R1P41586 468 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 NEDD1Q8NHV4 660 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 WWP1Q9H0M0 922 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 PCDHB12Q9Y5F1 795 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 SCFD2Q8WU76 684 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 FAM151AQ8WW52 585 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 CRAMP1Q96RY5 1269 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 CCSER1Q9C0I3 900 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 KDM4CQ9H3R0 1056 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 ZNF212Q9UDV6 495 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 KIF24Q5T7B8 1368 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 TMEM120BA0PK00 339 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 ERVK-10P10266 1014 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 VEGFAP15692 232 aaPredicted RBP9.68□□□□□ -0.86
ATL3-201ENST00000398868 VHLP40337 213 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 NCALDP61601 193 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 FMR1Q06787 632 aaKnown RBP eCLIP9.68□□□□□ -0.862e-6■■□□□ 12.9
ATL3-201ENST00000398868 SAPCD2Q86UD0 394 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 NAT16Q8N8M0 369 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 AAASQ9NRG9 546 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 TMEM191CA6NGB0 347 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 TAF4O00268 1085 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 KATNA1O75449 491 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 ADORA2AP29274 412 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 EFNA5P52803 228 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 SCFD1Q8WVM8 642 aa9.68□□□□□ -0.86
ATL3-201ENST00000398868 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms