RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 APPL1Q9UKG1 709 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 STRIP2Q9ULQ0 834 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 ABT1Q9ULW3 272 aaKnown RBP5.15□□□□□ -1.59
SMAD4-202ENST00000398417 CRYBG1Q9Y4K1 1723 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 SPDYE16A6NNV3 312 aaPredicted RBP5.15□□□□□ -1.59
SMAD4-202ENST00000398417 SPATA31C2B4DYI2 1134 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 CRCPO75575 148 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 PDGFRBP09619 1106 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 ATP4AP20648 1035 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 RBL1P28749 1068 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 WDR4P57081 412 aaKnown RBP5.15□□□□□ -1.59
SMAD4-202ENST00000398417 PIGHQ14442 188 aaPredicted RBP5.15□□□□□ -1.59
SMAD4-202ENST00000398417 CYP1B1Q16678 543 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 TSNAXIP1Q2TAA8 658 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 GLRA4Q5JXX5 417 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 FAM83AQ86UY5 434 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 RAB3IL1Q8TBN0 382 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 TSSK1BQ9BXA7 367 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 PORCNQ9H237 461 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 ARL8BQ9NVJ2 186 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 GGA2Q9UJY4 613 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 FIS1Q9Y3D6 152 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 PTPRJQ12913 1337 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 TCHHQ07283 1943 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 B2RBV5 119 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 ALOX15BO15296 676 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 MAFGO15525 162 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 CREB3O43889 395 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 FAM155BO75949 473 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 KDELR1P24390 212 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 ARL2P36404 184 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 ARL4AP40617 200 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 ZNF200P98182 395 aaPredicted RBP5.15□□□□□ -1.59
SMAD4-202ENST00000398417 SFSWAPQ12872 951 aaKnown RBP5.15□□□□□ -1.59
SMAD4-202ENST00000398417 C16orf46Q6P387 395 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 DENND5BQ6ZUT9 1274 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 RNF169Q8NCN4 708 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 C7orf43Q8WVR3 580 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 BTBD7Q9P203 1132 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 TXNDC16Q9P2K2 825 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 ONECUT3O60422 494 aaPredicted RBP5.15□□□□□ -1.59
SMAD4-202ENST00000398417 KRT7P08729 469 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 MMRN1Q13201 1228 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 CHI3L2Q15782 390 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 ZC3H12AQ5D1E8 599 aaKnown RBP5.15□□□□□ -1.59
SMAD4-202ENST00000398417 JADE1Q6IE81 842 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 CPT1BQ92523 772 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 ADAM7Q9H2U9 754 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 SNX25Q9H3E2 840 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 TMEM134Q9H6X4 195 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 LRP5O75197 1615 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 GOLGA8CPA6NN73 597 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 APOL1O14791 398 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 ADCY3O60266 1144 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 EDF1O60869 148 aaKnown RBP5.14□□□□□ -1.59
SMAD4-202ENST00000398417 NFICP08651 508 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 KRT4P19013 534 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 TAC1P20366 129 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 MIPP30301 263 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 PHKA2P46019 1235 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 AMHR2Q16671 573 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 PTPN20Q4JDL3 420 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 TREML2Q5T2D2 321 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 MROH9Q5TGP6 573 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 ACOT1Q86TX2 421 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 TRABD2AQ86V40 505 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 RASSF3Q86WH2 238 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 NUDCD3Q8IVD9 361 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 FAM172AQ8WUF8 416 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 ZNF75CPQ92670 426 aaPredicted RBP5.14□□□□□ -1.59
SMAD4-202ENST00000398417 TMEM176AQ96HP8 235 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 SCYL1Q96KG9 808 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 SHCBP1LQ9BZQ2 653 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 C2orf71A6NGG8 1288 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 GYG2O15488 501 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 DYNC1LI2O43237 492 aaPredicted RBP5.14□□□□□ -1.59
SMAD4-202ENST00000398417 ERBB2P04626 1255 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 MYL3P08590 195 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 KRT16P08779 473 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 PAEPP09466 180 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 PTPN11Q06124 597 aaPredicted RBP5.14□□□□□ -1.59
SMAD4-202ENST00000398417 RAB6CQ53S08 254 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 TRPM4Q8TD43 1214 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 KLC2Q9H0B6 622 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 RAB6CQ9H0N0 254 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 KLK14Q9P0G3 267 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 ATP8B3O60423 1300 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 MAP2P11137 1827 aaKnown RBP5.14□□□□□ -1.59
SMAD4-202ENST00000398417 ATP9BO43861 1147 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 AVILO75366 819 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 NCF2P19878 526 aaPredicted RBP5.14□□□□□ -1.59
SMAD4-202ENST00000398417 SP2Q02086 613 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 TAP1Q03518 808 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 R3HDM1Q15032 1099 aaKnown RBP5.14□□□□□ -1.59
SMAD4-202ENST00000398417 CGB2Q6NT52 195 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 XYLT1Q86Y38 959 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 FITM2Q8N6M3 262 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 E2F7Q96AV8 911 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 ATXN7L3BQ96GX2 97 aa5.14□□□□□ -1.59
SMAD4-202ENST00000398417 TRIM6Q9C030 488 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms