RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 USP18Q9UMW8 372 aa6.87□□□□□ -1.31
SMARCE1P6-201ENST00000398372 SIT1Q9Y3P8 196 aa6.87□□□□□ -1.31
SMARCE1P6-201ENST00000398372 MTF2Q9Y483 593 aaPredicted RBP6.87□□□□□ -1.31
SMARCE1P6-201ENST00000398372 PATJQ8NI35 1801 aa6.87□□□□□ -1.31
SMARCE1P6-201ENST00000398372 DOCK6Q96HP0 2047 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 TARSL2A2RTX5 802 aaKnown RBP6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 SFI1A8K8P3 1242 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 CYSRT1A8MQ03 144 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 F8W810 466 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 RNF225M0QZC1 329 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 ACKR2O00590 384 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 SLC30A4O14863 429 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 AHCYL1O43865 530 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 GDF9O60383 454 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 HIP1RO75146 1068 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 TBCAO75347 108 aaKnown RBP6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 RTN3O95197 1032 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 KRT18P05783 430 aaKnown RBP6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 CNPP09543 421 aaKnown RBP6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 MAPTP10636 758 aaKnown RBP6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 SCP2P22307 547 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 KLRC2P26717 231 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 PMLP29590 882 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 SLC8A1P32418 973 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 NPTX2P47972 431 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 EFNA5P52803 228 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 PEX3P56589 373 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 SNRPFP62306 86 aaKnown RBP6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 DSC1Q08554 894 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 GIT2Q14161 759 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 KNOP1Q1ED39 458 aaKnown RBP6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 CCDC40Q4G0X9 1142 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 CCDC122Q5T0U0 273 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 ATF7IP2Q5U623 682 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 DESI1Q6ICB0 168 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 WDR93Q6P2C0 686 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 PDXDC1Q6P996 788 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 C1orf186Q6ZWK4 172 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 B4GALNT4Q76KP1 1039 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 TRAPPC11Q7Z392 1133 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 ZNF572Q7Z3I7 529 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 DAW1Q8N136 415 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 FAM71BQ8TC56 605 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 GPR152Q8TDT2 470 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 SCFD1Q8WVM8 642 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 KLHL5Q96PQ7 755 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 ALS2CR12Q96Q35 445 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 RPS6KC1Q96S38 1066 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 CHP1Q99653 195 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 ADPGKQ9BRR6 497 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 MKNK1Q9BUB5 465 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 HERC2P3Q9BVR0 1158 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 TIPINQ9BVW5 301 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 COLEC11Q9BWP8 271 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 CACNG4Q9UBN1 327 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 RNF14Q9UBS8 474 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 GGA2Q9UJY4 613 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 ANGPTL2Q9UKU9 493 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 ZMIZ1Q9ULJ6 1067 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 SMG5Q9UPR3 1016 aaKnown RBP6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 REXO2Q9Y3B8 237 aaKnown RBP6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 IRAK3Q9Y616 596 aa6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 BZW2Q9Y6E2 419 aaKnown RBP6.86□□□□□ -1.31
SMARCE1P6-201ENST00000398372 ZMYM2Q9UBW7 1377 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 CASTOR2A6NHX0 329 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 SOBPA7XYQ1 873 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 BTNL10A8MVZ5 291 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 C1QTNF9BB2RNN3 333 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 K7ERI5 159 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 EBAG9O00559 213 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 C2CD2LO14523 706 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 PTGESO14684 152 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 POLR3GO15318 223 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 SLC16A4O15374 487 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 TACC1O75410 805 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 RECQL4O94761 1208 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 GFPT2O94808 682 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 FSBPO95073 299 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 EFEMP2O95967 443 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 SOD2P04179 222 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 SERPING1P05155 500 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 URODP06132 367 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 PROS1P07225 676 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 FESP07332 822 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 NUDT7P0C024 238 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 C1QTNF9P0C862 333 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 EZRP15311 586 aaKnown RBP6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 TCP1P17987 556 aaKnown RBP6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 KIF11P52732 1056 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 ZNF131P52739 623 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 CSTF1Q05048 431 aaKnown RBP6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 DEUP1Q05D60 604 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 DMWDQ09019 674 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 IFFO1Q0D2I5 559 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 SPEM2Q0P670 501 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 MAPK7Q13164 816 aa6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 DMP1Q13316 513 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1P6-201ENST00000398372 ADAM9Q13443 819 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms