RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 CSGALNACT2Q8N6G5 542 aa10.54□□□□□ -0.72
NIFKP1-201ENST00000398317 CACTINQ8WUQ7 758 aaKnown RBP10.54□□□□□ -0.72
NIFKP1-201ENST00000398317 USP13Q92995 863 aaPredicted RBP10.54□□□□□ -0.72
NIFKP1-201ENST00000398317 CBWD1Q9BRT8 395 aa10.54□□□□□ -0.72
NIFKP1-201ENST00000398317 EBF3Q9H4W6 596 aa10.54□□□□□ -0.72
NIFKP1-201ENST00000398317 THG1LQ9NWX6 298 aaKnown RBP10.54□□□□□ -0.72
NIFKP1-201ENST00000398317 DDX43Q9NXZ2 648 aaKnown RBP10.54□□□□□ -0.72
NIFKP1-201ENST00000398317 RBAKQ9NYW8 714 aaPredicted RBP10.54□□□□□ -0.72
NIFKP1-201ENST00000398317 CDV3Q9UKY7 258 aaKnown RBP10.54□□□□□ -0.72
NIFKP1-201ENST00000398317 L1RE1Q9UN81 338 aa10.54□□□□□ -0.72
NIFKP1-201ENST00000398317 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.54□□□□□ -0.72
NIFKP1-201ENST00000398317 ACACBO00763 2458 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 DCDC2BA2VCK2 349 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 OTOL1A6NHN0 477 aaPredicted RBP10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 PRR5-ARHGAP8B1AHC4 643 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 HUS1O60921 280 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 KRT19P08727 400 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 ARSAP15289 507 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 PDCP20941 246 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 SYT1P21579 422 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 GARTP22102 1010 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 AVPR1AP37288 418 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 PNPLA4P41247 253 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 STAT6P42226 847 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 ARHGAP8P85298 464 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 LMNB2Q03252 620 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 C6orf118Q5T5N4 469 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 LMBRD2Q68DH5 695 aaPredicted RBP10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 PKN3Q6P5Z2 889 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 CCDC73Q6ZRK6 1079 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 LONP2Q86WA8 852 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 PDILTQ8N807 584 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 CXorf38Q8TB03 319 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 RIN3Q8TB24 985 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 USP28Q96RU2 1077 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 FAM83CQ9BQN1 747 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 MTMR12Q9C0I1 747 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 PDE11AQ9HCR9 933 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 HPS4Q9NQG7 708 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 PANK4Q9NVE7 773 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 SIX4Q9UIU6 781 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 GTF3C4Q9UKN8 822 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 SNX9Q9Y5X1 595 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 MYO16Q9Y6X6 1858 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 MYOFQ9NZM1 2061 aa10.53□□□□□ -0.72
NIFKP1-201ENST00000398317 EPG5Q9HCE0 2579 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 FRMD3A2A2Y4 597 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 EXTL3O43909 919 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 TADA3O75528 432 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 PAPSS2O95340 614 aaPredicted RBP10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 LDHAP00338 332 aaKnown RBP10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 RETP07949 1114 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 CSH1P0DML2 217 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 CSH2P0DML3 217 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 SDHBP21912 280 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 DDX6P26196 483 aaKnown RBP eCLIP10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 PXNP49023 591 aaPredicted RBP10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 MYL7Q01449 175 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 RUNX3Q13761 415 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 NFE2Q16621 373 aaPredicted RBP10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 NAIF1Q69YI7 327 aaPredicted RBP10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 FSTL4Q6MZW2 842 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 MRPL14Q6P1L8 145 aaKnown RBP10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 CEP68Q76N32 757 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 GLIS3Q8NEA6 775 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 TTC16Q8NEE8 873 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 MRPS31Q92665 395 aaKnown RBP10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 HPS3Q969F9 1004 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 CHFRQ96EP1 664 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 POM121Q96HA1 1249 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 PKMYT1Q99640 499 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 ACBD6Q9BR61 282 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 TRPC7Q9HCX4 862 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 OLFML3Q9NRN5 406 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 TDP1Q9NUW8 608 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 POLR3BQ9NW08 1133 aaPredicted RBP10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 ITGA11Q9UKX5 1188 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 MTMR6Q9Y217 621 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 PTPRDP23468 1912 aa10.52□□□□□ -0.73
NIFKP1-201ENST00000398317 ABCA7Q8IZY2 2146 aa10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 CHD8Q9HCK8 2581 aa10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 HELZP42694 1942 aaKnown RBP10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 ATP2C2O75185 946 aa10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 EGFP01133 1207 aa10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 TMEM191BP0C7N4 346 aa10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 RBP5P82980 135 aa10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 GRSF1Q12849 480 aaKnown RBP eCLIP10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 ALCAMQ13740 583 aa10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 SLC39A14Q15043 492 aa10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 SOWAHAQ2M3V2 549 aa10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 TMEM196Q5HYL7 178 aa10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 CC2D1AQ6P1N0 951 aaPredicted RBP10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 MON1AQ86VX9 555 aa10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 WDR5BQ86VZ2 330 aa10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 SCN4BQ8IWT1 228 aa10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 ADGRF2Q8IZF7 708 aa10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 TMEM86AQ8N2M4 240 aa10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 GPD1LQ8N335 351 aa10.51□□□□□ -0.73
NIFKP1-201ENST00000398317 SYNPOQ8N3V7 929 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms