RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 TOB1P50616 345 aaPredicted RBP3.33□□□□□ -1.88
CD47-203ENST00000398258 ZNF135P52742 658 aaPredicted RBP3.33□□□□□ -1.88
CD47-203ENST00000398258 PSMC1P62191 440 aaKnown RBP3.33□□□□□ -1.88
CD47-203ENST00000398258 TNFAIP2Q03169 654 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 MPEG1Q2M385 716 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 SLC35G1Q2M3R5 365 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 TMEM95Q3KNT9 176 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 INO80DQ53TQ3 878 aaPredicted RBP3.33□□□□□ -1.88
CD47-203ENST00000398258 FAM160B1Q5W0V3 765 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 C1orf228Q6PIY5 440 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 KRT28Q7Z3Y7 464 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 NKAPQ8N5F7 415 aaKnown RBP3.33□□□□□ -1.88
CD47-203ENST00000398258 DNAJC5GQ8N7S2 189 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 VGLL2Q8N8G2 317 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 POC1BQ8TC44 478 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 RNF31Q96EP0 1072 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 PDLIM2Q96JY6 352 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 SNX22Q96L94 193 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 ZNF48Q96MX3 618 aaPredicted RBP3.33□□□□□ -1.88
CD47-203ENST00000398258 MED15Q96RN5 788 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 MESP1Q9BRJ9 268 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 CRB3Q9BUF7 120 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 CNPPD1Q9BV87 410 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 TLR10Q9BXR5 811 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 STK33Q9BYT3 514 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 REXO4Q9GZR2 422 aaKnown RBP3.33□□□□□ -1.88
CD47-203ENST00000398258 CHST8Q9H2A9 424 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 SACM1LQ9NTJ5 587 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 ETAA1Q9NY74 926 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 VSX1Q9NZR4 365 aaPredicted RBP3.33□□□□□ -1.88
CD47-203ENST00000398258 LRP12Q9Y561 859 aa3.33□□□□□ -1.88
CD47-203ENST00000398258 A0A087WV62 115 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 E7ENX8 843 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 HNRNPDLO14979 420 aaKnown RBP3.32□□□□□ -1.88
CD47-203ENST00000398258 THAP12O43422 761 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 PROP1O75360 226 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 GPANK1O95872 356 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 CFIP05156 583 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 XRCC6P12956 609 aaKnown RBP eCLIP3.32□□□□□ -1.88
CD47-203ENST00000398258 ABCB4P21439 1286 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 UCP3P55916 312 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 BLOC1S1P78537 153 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 TAP2Q03519 686 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 PIGFQ07326 219 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 PMS2P11Q13670 270 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 NPY5RQ15761 445 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 ARL13BQ3SXY8 428 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 AMOTQ4VCS5 1084 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 KLHDC7AQ5VTJ3 777 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 RUSC1-AS1Q66K80 236 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 C11orf87Q6NUJ2 197 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.32□□□□□ -1.88
CD47-203ENST00000398258 Q6ZNX1 250 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 BEND5Q7L4P6 421 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 CFAP52Q8N1V2 620 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 Q8NA96 180 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 FANCBQ8NB91 859 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 POF1BQ8WVV4 589 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 SLC9A6Q92581 669 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 FUBP1Q96AE4 644 aaKnown RBP3.32□□□□□ -1.88
CD47-203ENST00000398258 IQCDQ96DY2 449 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 HERPUD2Q9BSE4 406 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 POLR3GLQ9BT43 218 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 ALOXE3Q9BYJ1 711 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 RNPEPQ9H4A4 650 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 TMEM8AQ9HCN3 771 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 SLAMF7Q9NQ25 335 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 MTMR4Q9NYA4 1195 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 HSFX1Q9UBD0 423 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 XPR1Q9UBH6 696 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 HESX1Q9UBX0 185 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 CDYLQ9Y232 598 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 LRCH1Q9Y2L9 728 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 TMX2Q9Y320 296 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 NEU2Q9Y3R4 380 aa3.32□□□□□ -1.88
CD47-203ENST00000398258 SPATA31A3Q5VYP0 1347 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 CNTNAP2Q9UHC6 1331 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 A0A087WZ62 844 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 GOLGA6L3A6NEY3 463 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 F5H423 210 aaPredicted RBP3.31□□□□□ -1.88
CD47-203ENST00000398258 DCLK1O15075 740 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 CCP110O43303 1012 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 CREB3O43889 395 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 ERN1O75460 977 aaKnown RBP3.31□□□□□ -1.88
CD47-203ENST00000398258 SOAT2O75908 522 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 CDKL5O76039 1030 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 INMTO95050 263 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 KIF20AO95235 890 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 FOSP01100 380 aaPredicted RBP3.31□□□□□ -1.88
CD47-203ENST00000398258 HLA-DOAP06340 250 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 HARSP12081 509 aaKnown RBP3.31□□□□□ -1.88
CD47-203ENST00000398258 EEF1GP26641 437 aaKnown RBP3.31□□□□□ -1.88
CD47-203ENST00000398258 GABRB3P28472 473 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 CCKBRP32239 447 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 TRAPPC10P48553 1259 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 CXADRP78310 365 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 SSBP2P81877 361 aaPredicted RBP3.31□□□□□ -1.88
CD47-203ENST00000398258 TUBB8Q3ZCM7 444 aa3.31□□□□□ -1.88
CD47-203ENST00000398258 DCAF12L1Q5VU92 463 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms