RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 TBC1D17Q9HA65 648 aa17.75■□□□□ 0.43
APTR-201ENST00000398043 CSNK1G1Q9HCP0 422 aa17.75■□□□□ 0.43
APTR-201ENST00000398043 IL37Q9NZH6 218 aa17.75■□□□□ 0.43
APTR-201ENST00000398043 GCNT4Q9P109 453 aa17.75■□□□□ 0.43
APTR-201ENST00000398043 RWDD2AQ9UIY3 292 aa17.75■□□□□ 0.43
APTR-201ENST00000398043 BEST1O76090 585 aa17.74■□□□□ 0.43
APTR-201ENST00000398043 CCDC130P13994 396 aa17.74■□□□□ 0.43
APTR-201ENST00000398043 MLF2Q15773 248 aaPredicted RBP17.74■□□□□ 0.43
APTR-201ENST00000398043 UBR7Q8N806 425 aa17.74■□□□□ 0.43
APTR-201ENST00000398043 MAB21L3Q8N8X9 362 aa17.74■□□□□ 0.43
APTR-201ENST00000398043 RIN3Q8TB24 985 aa17.74■□□□□ 0.43
APTR-201ENST00000398043 GPT2Q8TD30 523 aa17.74■□□□□ 0.43
APTR-201ENST00000398043 USP13Q92995 863 aaPredicted RBP17.74■□□□□ 0.43
APTR-201ENST00000398043 SMARCD1Q96GM5 515 aa17.74■□□□□ 0.43
APTR-201ENST00000398043 SLC22A12Q96S37 553 aa17.74■□□□□ 0.43
APTR-201ENST00000398043 HNRNPABQ99729 332 aaKnown RBP17.74■□□□□ 0.43
APTR-201ENST00000398043 SMOQ99835 787 aa17.74■□□□□ 0.43
APTR-201ENST00000398043 SRRTQ9BXP5 876 aaKnown RBP17.74■□□□□ 0.43
APTR-201ENST00000398043 MFSD1Q9H3U5 465 aa17.74■□□□□ 0.43
APTR-201ENST00000398043 ATG2BQ96BY7 2078 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 CLSTN1O94985 981 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 ANXA13P27216 316 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 GDI1P31150 447 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 PRKCQQ04759 706 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 CCDC40Q4G0X9 1142 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 IRF2BP1Q8IU81 584 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 MLKLQ8NB16 471 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 CCDC150Q8NCX0 1101 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 PRSS33Q8NF86 280 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 FLCNQ8NFG4 579 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 SLC2A14Q8TDB8 520 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 MRPS31Q92665 395 aaKnown RBP17.73■□□□□ 0.43
APTR-201ENST00000398043 NT5C1AQ9BXI3 368 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 SMG9Q9H0W8 520 aaKnown RBP17.73■□□□□ 0.43
APTR-201ENST00000398043 NUP62CLQ9H1M0 184 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 BRD9Q9H8M2 597 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 CISHQ9NSE2 258 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 FAM49BQ9NUQ9 324 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 DLGAP2Q9P1A6 1054 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 CCL26Q9Y258 94 aa17.73■□□□□ 0.43
APTR-201ENST00000398043 FAM92AA1XBS5 289 aa17.72■□□□□ 0.43
APTR-201ENST00000398043 C2orf78A6NCI8 922 aa17.72■□□□□ 0.43
APTR-201ENST00000398043 CHADO15335 359 aa17.72■□□□□ 0.43
APTR-201ENST00000398043 P4HA2O15460 535 aa17.72■□□□□ 0.43
APTR-201ENST00000398043 GNA14O95837 355 aa17.72■□□□□ 0.43
APTR-201ENST00000398043 CD58P19256 250 aa17.72■□□□□ 0.43
APTR-201ENST00000398043 NUBP1P53384 320 aa17.72■□□□□ 0.43
APTR-201ENST00000398043 RAD23BP54727 409 aa17.72■□□□□ 0.43
APTR-201ENST00000398043 ZNF268Q14587 947 aaPredicted RBP17.72■□□□□ 0.43
APTR-201ENST00000398043 WDR44Q5JSH3 913 aa17.72■□□□□ 0.43
APTR-201ENST00000398043 ZNF687Q8N1G0 1237 aa17.72■□□□□ 0.43
APTR-201ENST00000398043 CELF5Q8N6W0 485 aaKnown RBP17.72■□□□□ 0.43
APTR-201ENST00000398043 SLC4A11Q8NBS3 891 aa17.72■□□□□ 0.43
APTR-201ENST00000398043 IRF7Q92985 503 aa17.72■□□□□ 0.43
APTR-201ENST00000398043 GBP4Q96PP9 640 aa17.72■□□□□ 0.43
APTR-201ENST00000398043 DMAP1Q9NPF5 467 aaPredicted RBP17.72■□□□□ 0.43
APTR-201ENST00000398043 HEBP1Q9NRV9 189 aa17.72■□□□□ 0.43
APTR-201ENST00000398043 KRT82Q9NSB4 513 aa17.72■□□□□ 0.43
APTR-201ENST00000398043 ATP8B3O60423 1300 aa17.72■□□□□ 0.43
APTR-201ENST00000398043 ZNF840PA6NDX5 716 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 HHLA1C9JL84 531 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 ZNF263O14978 683 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 AP1G2O75843 785 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 OLFM2O95897 454 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 KCNH2Q12809 1159 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 TCF15Q12870 199 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 CUL2Q13617 745 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 DPCR1Q3MIW9 517 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 RBM43Q6ZSC3 357 aaKnown RBP17.71■□□□□ 0.43
APTR-201ENST00000398043 NUP93Q8N1F7 819 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 TTC39CQ8N584 583 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 PJA1Q8NG27 643 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 SCAMP5Q8TAC9 235 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 BPIFB1Q8TDL5 484 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 CYFIP2Q96F07 1278 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 SHDQ96IW2 340 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 CYP2S1Q96SQ9 504 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 MED10Q9BTT4 135 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 TDP1Q9NUW8 608 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 EHD2Q9NZN4 543 aa17.71■□□□□ 0.43
APTR-201ENST00000398043 KANSL1LA0AUZ9 987 aa17.7■□□□□ 0.42
APTR-201ENST00000398043 RTN3O95197 1032 aaPredicted RBP17.7■□□□□ 0.42
APTR-201ENST00000398043 GLULP15104 373 aa17.7■□□□□ 0.42
APTR-201ENST00000398043 TCF3P15923 654 aa17.7■□□□□ 0.42
APTR-201ENST00000398043 PFKLP17858 780 aa17.7■□□□□ 0.42
APTR-201ENST00000398043 AVPR1AP37288 418 aa17.7■□□□□ 0.42
APTR-201ENST00000398043 PPP3CCP48454 512 aa17.7■□□□□ 0.42
APTR-201ENST00000398043 SLC5A3P53794 718 aa17.7■□□□□ 0.42
APTR-201ENST00000398043 MLLT6P55198 1093 aaPredicted RBP17.7■□□□□ 0.42
APTR-201ENST00000398043 ZXDBP98169 803 aa17.7■□□□□ 0.42
APTR-201ENST00000398043 TAF10Q12962 218 aa17.7■□□□□ 0.42
APTR-201ENST00000398043 FZD5Q13467 585 aa17.7■□□□□ 0.42
APTR-201ENST00000398043 ARHGAP29Q52LW3 1261 aa17.7■□□□□ 0.42
APTR-201ENST00000398043 PPP1R26Q5T8A7 1209 aaPredicted RBP17.7■□□□□ 0.42
APTR-201ENST00000398043 SNX30Q5VWJ9 437 aa17.7■□□□□ 0.42
APTR-201ENST00000398043 CLEC20AQ6ZU45 233 aa17.7■□□□□ 0.42
APTR-201ENST00000398043 TPRG1Q6ZUI0 275 aa17.7■□□□□ 0.42
APTR-201ENST00000398043 ARL14EPQ8N8R7 260 aaPredicted RBP17.7■□□□□ 0.42
APTR-201ENST00000398043 FAM83CQ9BQN1 747 aa17.7■□□□□ 0.42
APTR-201ENST00000398043 FOXQ1Q9C009 403 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms