RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 FSCN1Q16658 493 aaKnown RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 GKAP1Q5VSY0 366 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 NAA35Q5VZE5 725 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 NLRP9Q7RTR0 991 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 FBXO16Q8IX29 292 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 NLRP4Q96MN2 994 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 C11orf70Q9BRQ4 267 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 DCLK3Q9C098 648 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 DLG4P78352 724 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 TADA2BQ86TJ2 420 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 IFNL1Q8IU54 200 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 SLC43A3Q8NBI5 491 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 CYFIP2Q96F07 1278 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 TRIM6Q9C030 488 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 MTMR12Q9C0I1 747 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 TSPYL2Q9H2G4 693 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 C17orf102A2RUQ5 167 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 EPOP01588 193 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 RARBP10826 455 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 ATF2P15336 505 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 SERPINB9P50453 376 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 PSMC1P62191 440 aaKnown RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 TTC17Q96AE7 1141 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 ACTR5Q9H9F9 607 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 ANKFY1Q9P2R3 1169 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 SMIM28A0A1B0GU29 152 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 CARSP49589 748 aaKnown RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 IRAK1P51617 712 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 SNAP25P60880 206 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 YWHAZP63104 245 aaKnown RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 APPL2Q8NEU8 664 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 ACTL9Q8TC94 416 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 GLT1D1Q96MS3 346 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 PPP1R10Q96QC0 940 aaKnown RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 PCIF1Q9H4Z3 704 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 SEC16AO15027 2179 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 A0A087WZ62 844 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 OR6C75A6NL08 312 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 RASGRF2O14827 1237 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 MMEP08473 750 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 HK2P52789 917 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 GOLGA8FQ08AF8 430 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 GOLGA8DPQ0D2H9 430 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 PPP2R5DQ14738 602 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 ARL13BQ3SXY8 428 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 MFN1Q8IWA4 741 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 SMC1BQ8NDV3 1235 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 AZIN2Q96A70 460 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 ARHGEF26Q96DR7 871 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 SRPK1Q96SB4 655 aaKnown RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 FDXACB1Q9BRP7 624 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 OSBPL2Q9H1P3 480 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 STN1Q9H668 368 aaKnown RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 NSMCE4AQ9NXX6 385 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 COG5Q9UP83 839 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 A0A087WUV0 522 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 KPNA7A9QM74 516 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 AGPSO00116 658 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 KRT5P13647 590 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 YBX3P16989 372 aaKnown RBP eCLIP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 HSD17B3P37058 310 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 ETFBP38117 255 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 PDK1Q15118 436 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 KLHDC10Q6PID8 442 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 RNF180Q86T96 592 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 PPIL6Q8IXY8 311 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 SLITRK1Q96PX8 696 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 DPP3Q9NY33 737 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 FGF10O15520 208 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 RBP3P10745 1247 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 PYGMP11217 842 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 SMPD1P17405 629 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 CLCN3P51790 818 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 MFSD10Q14728 455 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 UGP2Q16851 508 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 OLFML1Q6UWY5 402 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 LRRC6Q86X45 466 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 RAVER1Q8IY67 606 aaKnown RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 TSGA13Q96PP4 275 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 TUBB6Q9BUF5 446 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 TMBIM4Q9HC24 238 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 FARP1Q9Y4F1 1045 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 NUMA1Q14980 2115 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 M0QZQ0 153 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 KRT37O76014 449 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 SGPL1O95470 568 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 RARAP10276 462 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 CES1P23141 567 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 GJA5P36382 358 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 PRKAA2P54646 552 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 LILRA4P59901 499 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 ZNF844Q08AG5 666 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 CCDC14Q49A88 953 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 C10orf67Q8IYJ2 551 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 ALLCQ8N6M5 410 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 RDH13Q8NBN7 331 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 KAT5Q92993 513 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 SYNCQ9H7C4 482 aa6.13□□□□□ -1.43
PTPRD-206ENST00000397617 TRIM10Q9UDY6 481 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms