RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 FAM172AQ8WUF8 416 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 PRCCQ92733 491 aaPredicted RBP10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 ATXN7L3BQ96GX2 97 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 SNX25Q9H3E2 840 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 CCL15-CCL14A0A0B4J2E2 113 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 RARBP10826 455 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 IVDP26440 423 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 ELK3P41970 407 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 CDKN2BP42772 138 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 ATXN1P54253 815 aaKnown RBP10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 KCNJ2P63252 427 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 MCL1Q07820 350 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 BMPR2Q13873 1038 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 TARBP2Q15633 366 aaKnown RBP10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 CCL15Q16663 113 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 FYB2Q5VWT5 728 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 KIRREL3Q8IZU9 778 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 ZCCHC9Q8N567 271 aaKnown RBP10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 C12orf50Q8NA57 414 aaPredicted RBP10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 GPRC5AQ8NFJ5 357 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 C18orf25Q96B23 403 aaPredicted RBP10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 GOLGA2P5Q9HBQ8 144 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 ADAMTS5Q9UNA0 930 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 ASB14A6NK59 587 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 CAPN9O14815 690 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 PPEF2O14830 753 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 SNX3O60493 162 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 LSM8O95777 96 aaKnown RBP10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 ACAT1P24752 427 aaKnown RBP10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 TARSP26639 723 aaKnown RBP10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 GHRHRQ02643 423 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 TNFAIP2Q03169 654 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 MDH1BQ5I0G3 518 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 FNBP1LQ5T0N5 605 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 CEP128Q6ZU80 1094 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 FASTKD5Q7L8L6 764 aaKnown RBP10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 PAFAH2Q99487 392 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 L3MBTL1Q9Y468 752 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 FOCADQ5VW36 1801 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 ATG7O95352 703 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 CPP00450 1065 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 CCDC130P13994 396 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 ADRA1DP25100 572 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 SESN2P58004 480 aaPredicted RBP10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 FAM183BPQ6ZVS7 135 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 FAM131BQ86XD5 332 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 SLC4A11Q8NBS3 891 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 AGAP3Q96P47 875 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 TMEM237Q96Q45 408 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 UBN1Q9NPG3 1134 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 CACNG4Q9UBN1 327 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 SIX4Q9UIU6 781 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 ARL2BPQ9Y2Y0 163 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 STYXL1Q9Y6J8 313 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 ATP8B3O60423 1300 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 HMGCRP04035 888 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 MYL3P08590 195 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 CTSHP09668 335 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 MXRA7P84157 204 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 TAP1Q03518 808 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 MBTD1Q05BQ5 628 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 KLF1Q13351 362 aaPredicted RBP10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 TWF2Q6IBS0 349 aaKnown RBP10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 PPP1R2P3Q6NXS1 205 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 PPIL6Q8IXY8 311 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 EXOC8Q8IYI6 725 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 FUKQ8N0W3 1084 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 TTC13Q8NBP0 860 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 MAML1Q92585 1016 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 RNF34Q969K3 372 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 TTC25Q96NG3 672 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 ZNF317Q96PQ6 595 aaPredicted RBP10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 MAGEB5Q9BZ81 275 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 PHTF1Q9UMS5 762 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 LOC102724159A0A0B4J2E5 919 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 SIGLEC16A6NMB1 481 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 PDHXO00330 501 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 LPXNO60711 386 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 FAM155BO75949 473 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 FSBPO95073 299 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 IL18RAPO95256 599 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 RBL1P28749 1068 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 PTP4A2Q12974 167 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 SNAPC2Q13487 334 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 PWP2Q15269 919 aaKnown RBP10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 SLC10A6Q3KNW5 377 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 PPP1R26Q5T8A7 1209 aaPredicted RBP10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 KCNV1Q6PIU1 500 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 CCDC91Q7Z6B0 441 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 RMDN2Q96LZ7 410 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 FAM111AQ96PZ2 611 aa10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 TRIM56Q9BRZ2 755 aaKnown RBP10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 PSMC3IPQ9P2W1 217 aaPredicted RBP10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 TIMM13Q9Y5L4 95 aaPredicted RBP10.91□□□□□ -0.66
CPSF1P1-201ENST00000397477 PDE4DIPQ5VU43 2346 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 EPHX2P34913 555 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 PTK7Q13308 1070 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 LAMC2Q13753 1193 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 RCN2Q14257 317 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 GRIK4Q16099 956 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms