RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 ARHGEF26Q96DR7 871 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 FBXL21Q9UKT6 434 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.76□□□□□ -0.37
SMU1-201ENST00000397149 TPP2P29144 1249 aaPredicted RBP12.76□□□□□ -0.37
SMU1-201ENST00000397149 CACNA2D1P54289 1103 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 NPEPPSP55786 919 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 ZNF177Q13360 481 aaPredicted RBP12.76□□□□□ -0.37
SMU1-201ENST00000397149 KRR1Q13601 381 aaKnown RBP12.76□□□□□ -0.37
SMU1-201ENST00000397149 EFL1Q7Z2Z2 1120 aaKnown RBP12.76□□□□□ -0.37
SMU1-201ENST00000397149 RNPC3Q96LT9 517 aaKnown RBP12.76□□□□□ -0.37
SMU1-201ENST00000397149 SMIM22K7EJ46 135 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 RPS6KA5O75582 802 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 TARSP26639 723 aaKnown RBP12.76□□□□□ -0.37
SMU1-201ENST00000397149 RCVRNP35243 200 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 TMEM132DQ14C87 1099 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 UGT3A1Q6NUS8 523 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 TRMT11Q7Z4G4 463 aaKnown RBP12.76□□□□□ -0.37
SMU1-201ENST00000397149 OR2W6PQ8NHA6 318 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 ZNF333Q96JL9 665 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 MED15Q96RN5 788 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 SEPHS2Q99611 448 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 LCMT1Q9UIC8 334 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 ZBTB7AO95365 584 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 ITGA4P13612 1032 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 STARP49675 285 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 TTC39BQ5VTQ0 682 aaPredicted RBP12.76□□□□□ -0.37
SMU1-201ENST00000397149 TRPM8Q7Z2W7 1104 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 NT5DC3Q86UY8 548 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 DHX40Q8IX18 779 aaKnown RBP12.76□□□□□ -0.37
SMU1-201ENST00000397149 CHPFQ8IZ52 775 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 RAD54LQ92698 747 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 ZNF512BQ96KM6 892 aaPredicted RBP12.76□□□□□ -0.37
SMU1-201ENST00000397149 PAIP1Q9H074 479 aaKnown RBP12.76□□□□□ -0.37
SMU1-201ENST00000397149 KPNA6O60684 536 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 PGM3O95394 542 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 ITGADQ13349 1161 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 CRYMQ14894 314 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 PKN2Q16513 984 aaKnown RBP12.76□□□□□ -0.37
SMU1-201ENST00000397149 FAM171BQ6P995 826 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 TTLL6Q8N841 843 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 PIGKQ92643 395 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 ACOX2Q99424 681 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 ELP3Q9H9T3 547 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 TRPM2O94759 1503 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 PTPN23Q9H3S7 1636 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 PSMD11O00231 422 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 PDE9AO76083 593 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 TMEM179Q6ZVK1 233 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 RASGRP2Q7LDG7 609 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 LINC00301Q8NCQ3 95 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 TNKS2Q9H2K2 1166 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 CAB39LQ9H9S4 337 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 GPRC5DQ9NZD1 345 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 FEM1BQ9UK73 627 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 ASB14A6NK59 587 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 TSPAN3O60637 253 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 ADSLP30566 484 aaPredicted RBP12.75□□□□□ -0.37
SMU1-201ENST00000397149 DDR2Q16832 855 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 CASP12Q6UXS9 341 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 ATL2Q8NHH9 583 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 SERAC1Q96JX3 654 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 CEP44Q9C0F1 390 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 CRKP46108 304 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 EPS8Q12929 822 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 FIG4Q92562 907 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 ZNF222Q9UK12 451 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 SHOC2Q9UQ13 582 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 C2orf81A6NN90 581 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 PIK3CDO00329 1044 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 OR7A10O76100 309 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 MBL2P11226 248 aaPredicted RBP12.75□□□□□ -0.37
SMU1-201ENST00000397149 ATP6AP1LQ52LC2 224 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 PMF1Q6P1K2 205 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 DENND1BQ6P3S1 775 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 DOK6Q6PKX4 331 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 ULK2Q8IYT8 1036 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 RTKN2Q8IZC4 609 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 RGL4Q8IZJ4 473 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 MFSD1Q9H3U5 465 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 PSMC3IPQ9P2W1 217 aaPredicted RBP12.75□□□□□ -0.37
SMU1-201ENST00000397149 SRP68Q9UHB9 627 aaKnown RBP12.75□□□□□ -0.37
SMU1-201ENST00000397149 KPNA5O15131 536 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 OASLQ15646 514 aaKnown RBP12.75□□□□□ -0.37
SMU1-201ENST00000397149 CYP4A22Q5TCH4 519 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 TDRD10Q5VZ19 366 aaKnown RBP12.75□□□□□ -0.37
SMU1-201ENST00000397149 MIB1Q86YT6 1006 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 CLCC1Q96S66 551 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 TBC1D22BQ9NU19 505 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 TOR4AQ9NXH8 423 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 PRPF3O43395 683 aaKnown RBP12.75□□□□□ -0.37
SMU1-201ENST00000397149 GMFGO60234 142 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 PTPN12Q05209 780 aaKnown RBP12.75□□□□□ -0.37
SMU1-201ENST00000397149 LAMB3Q13751 1172 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 OTUD3Q5T2D3 398 aaPredicted RBP12.75□□□□□ -0.37
SMU1-201ENST00000397149 ARMC7Q9H6L4 198 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 CMTM6Q9NX76 183 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 PHF11Q9UIL8 331 aa12.75□□□□□ -0.37
SMU1-201ENST00000397149 PCCAP05165 728 aaPredicted RBP12.74□□□□□ -0.37
SMU1-201ENST00000397149 PSMD4P55036 377 aaKnown RBP12.74□□□□□ -0.37
SMU1-201ENST00000397149 TAP1Q03518 808 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms