RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 ZNF638Q14966 1978 aaKnown RBP15.48■□□□□ 0.07
SEC13-208ENST00000397109 NUP210Q8TEM1 1887 aaPredicted RBP15.48■□□□□ 0.07
SEC13-208ENST00000397109 KANSL1LA0AUZ9 987 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 TRIM49BA6NDI0 452 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 F8VP50 259 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 PI15O43692 258 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 GLULP15104 373 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 ASPAP45381 313 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 PPP3CCP48454 512 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 NDST1P52848 882 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 DPCR1Q3MIW9 517 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 ARHGAP29Q52LW3 1261 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 WDR44Q5JSH3 913 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 KLHL10Q6JEL2 608 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 FRMD5Q7Z6J6 570 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 TTC39CQ8N584 583 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 MAB21L3Q8N8X9 362 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 STKLD1Q8NE28 680 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 BPIFB1Q8TDL5 484 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 ELMO3Q96BJ8 720 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 MED10Q9BTT4 135 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 TTLL2Q9BWV7 592 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 OSBPL6Q9BZF3 934 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 ZNF518BQ9C0D4 1074 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 FAM124BQ9H5Z6 455 aaPredicted RBP15.47■□□□□ 0.07
SEC13-208ENST00000397109 KIF9Q9HAQ2 790 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 THG1LQ9NWX6 298 aaKnown RBP15.47■□□□□ 0.07
SEC13-208ENST00000397109 RAB20Q9NX57 234 aa15.47■□□□□ 0.07
SEC13-208ENST00000397109 MRPS17Q9Y2R5 130 aaKnown RBP15.47■□□□□ 0.07
SEC13-208ENST00000397109 CLDN5O00501 218 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 MAN2B1O00754 1011 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 PFKLP17858 780 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 PDE6CP51160 858 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 MLLT6P55198 1093 aaPredicted RBP15.46■□□□□ 0.07
SEC13-208ENST00000397109 PLCB2Q00722 1185 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 INCA1Q0VD86 236 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 DCAF17Q5H9S7 520 aaPredicted RBP15.46■□□□□ 0.07
SEC13-208ENST00000397109 TXNDC8Q6A555 127 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 TTI2Q6NXR4 508 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 ZNF852Q6ZMS4 543 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 TPRG1Q6ZUI0 275 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 ACOT1Q86TX2 421 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 CCDC105Q8IYK2 499 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 PJA1Q8NG27 643 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 CSGALNACT1Q8TDX6 532 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 NELFBQ8WX92 580 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 RSPRY1Q96DX4 576 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 SMARCD1Q96GM5 515 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 APOBEC3GQ9HC16 384 aaKnown RBP15.46■□□□□ 0.07
SEC13-208ENST00000397109 HEBP1Q9NRV9 189 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 TDP1Q9NUW8 608 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 GREB1Q4ZG55 1949 aa15.46■□□□□ 0.07
SEC13-208ENST00000397109 TRAV19A0A0A6YYK7 116 aa15.46■□□□□ 0.06
SEC13-208ENST00000397109 NCAM2O15394 837 aa15.46■□□□□ 0.06
SEC13-208ENST00000397109 TADA3O75528 432 aa15.46■□□□□ 0.06
SEC13-208ENST00000397109 RTN3O95197 1032 aaPredicted RBP15.46■□□□□ 0.06
SEC13-208ENST00000397109 PRAMEF12O95522 483 aa15.46■□□□□ 0.06
SEC13-208ENST00000397109 TCF15Q12870 199 aa15.46■□□□□ 0.06
SEC13-208ENST00000397109 ZNF268Q14587 947 aaPredicted RBP15.46■□□□□ 0.06
SEC13-208ENST00000397109 FAM35AQ86V20 835 aa15.46■□□□□ 0.06
SEC13-208ENST00000397109 GPIHBP1Q8IV16 184 aa15.46■□□□□ 0.06
SEC13-208ENST00000397109 DTWD2Q8NBA8 298 aa15.46■□□□□ 0.06
SEC13-208ENST00000397109 MSANTD3Q96H12 275 aa15.46■□□□□ 0.06
SEC13-208ENST00000397109 DUSP9Q99956 384 aaKnown RBP15.46■□□□□ 0.06
SEC13-208ENST00000397109 NT5C1AQ9BXI3 368 aa15.46■□□□□ 0.06
SEC13-208ENST00000397109 CBX8Q9HC52 389 aa15.46■□□□□ 0.06
SEC13-208ENST00000397109 DMAP1Q9NPF5 467 aaPredicted RBP15.46■□□□□ 0.06
SEC13-208ENST00000397109 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.46■□□□□ 0.063e-6■■■■■ 39.7
SEC13-208ENST00000397109 TRPM5Q9NZQ8 1165 aa15.46■□□□□ 0.06
SEC13-208ENST00000397109 DACH1Q9UI36 760 aa15.46■□□□□ 0.06
SEC13-208ENST00000397109 COQ4Q9Y3A0 265 aa15.46■□□□□ 0.06
SEC13-208ENST00000397109 NCANO14594 1321 aa15.45■□□□□ 0.06
SEC13-208ENST00000397109 GOLGA6L19H0YKK7 550 aa15.45■□□□□ 0.06
SEC13-208ENST00000397109 FGFR1OPO95684 399 aaKnown RBP15.45■□□□□ 0.06
SEC13-208ENST00000397109 GNA14O95837 355 aa15.45■□□□□ 0.06
SEC13-208ENST00000397109 USP17L7P0C7H9 530 aa15.45■□□□□ 0.06
SEC13-208ENST00000397109 ERCC5P28715 1186 aaPredicted RBP15.45■□□□□ 0.06
SEC13-208ENST00000397109 MAGEA9P43362 315 aa15.45■□□□□ 0.06
SEC13-208ENST00000397109 NHLH1Q02575 133 aa15.45■□□□□ 0.06
SEC13-208ENST00000397109 PAK1Q13153 545 aa15.45■□□□□ 0.06
SEC13-208ENST00000397109 UBXN2BQ14CS0 331 aa15.45■□□□□ 0.06
SEC13-208ENST00000397109 CCDC40Q4G0X9 1142 aa15.45■□□□□ 0.06
SEC13-208ENST00000397109 C1orf228Q6PIY5 440 aa15.45■□□□□ 0.06
SEC13-208ENST00000397109 FUKQ8N0W3 1084 aa15.45■□□□□ 0.06
SEC13-208ENST00000397109 NUP93Q8N1F7 819 aa15.45■□□□□ 0.06
SEC13-208ENST00000397109 SEMA4DQ92854 862 aa15.45■□□□□ 0.06
SEC13-208ENST00000397109 SLITRK1Q96PX8 696 aa15.45■□□□□ 0.06
SEC13-208ENST00000397109 FOXQ1Q9C009 403 aa15.45■□□□□ 0.06
SEC13-208ENST00000397109 C8orf33Q9H7E9 229 aaPredicted RBP15.45■□□□□ 0.06
SEC13-208ENST00000397109 LTB4R2Q9NPC1 389 aa15.45■□□□□ 0.06
SEC13-208ENST00000397109 COMMD8Q9NX08 183 aa15.45■□□□□ 0.06
SEC13-208ENST00000397109 CTNND2Q9UQB3 1225 aa15.45■□□□□ 0.06
SEC13-208ENST00000397109 OBSL1O75147 1896 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 MYH10P35580 1976 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 FAM170BA6NMN3 283 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 SMTNL1A8MU46 457 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 ARNTLO00327 626 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 PMM2O15305 246 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 CILPO75339 1184 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 AP1G2O75843 785 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms