RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 CALCAP01258 141 aa31.11■■■□□ 2.57
CHCHD4-202ENST00000396914 CDC25CP30307 473 aa31.11■■■□□ 2.57
CHCHD4-202ENST00000396914 TEAD2Q15562 447 aa31.11■■■□□ 2.57
CHCHD4-202ENST00000396914 ARHGAP17Q68EM7 881 aa31.11■■■□□ 2.57
CHCHD4-202ENST00000396914 NPAS3Q8IXF0 933 aa31.11■■■□□ 2.57
CHCHD4-202ENST00000396914 NUP93Q8N1F7 819 aa31.11■■■□□ 2.57
CHCHD4-202ENST00000396914 RNF214Q8ND24 703 aa31.11■■■□□ 2.57
CHCHD4-202ENST00000396914 SHKBP1Q8TBC3 707 aa31.11■■■□□ 2.57
CHCHD4-202ENST00000396914 DUSP16Q9BY84 665 aa31.11■■■□□ 2.57
CHCHD4-202ENST00000396914 NOTCH4Q99466 2003 aa31.1■■■□□ 2.57
CHCHD4-202ENST00000396914 C19orf67A6NJJ6 358 aa31.1■■■□□ 2.57
CHCHD4-202ENST00000396914 LAMP2P13473 410 aa31.1■■■□□ 2.57
CHCHD4-202ENST00000396914 UCHL3P15374 230 aa31.1■■■□□ 2.57
CHCHD4-202ENST00000396914 NPR3P17342 541 aa31.1■■■□□ 2.57
CHCHD4-202ENST00000396914 BRD2P25440 801 aaKnown RBP31.1■■■□□ 2.57
CHCHD4-202ENST00000396914 ARHGAP15Q53QZ3 475 aa31.1■■■□□ 2.57
CHCHD4-202ENST00000396914 CLEC20AQ6ZU45 233 aa31.1■■■□□ 2.57
CHCHD4-202ENST00000396914 PLCB1Q9NQ66 1216 aa31.1■■■□□ 2.57
CHCHD4-202ENST00000396914 TSPAN16Q9UKR8 245 aa31.1■■■□□ 2.57
CHCHD4-202ENST00000396914 ZFP37Q9Y6Q3 630 aaPredicted RBP31.1■■■□□ 2.57
CHCHD4-202ENST00000396914 RFX1P22670 979 aa31.09■■■□□ 2.57
CHCHD4-202ENST00000396914 ZNF445P59923 1031 aa31.09■■■□□ 2.57
CHCHD4-202ENST00000396914 USP46P62068 366 aa31.09■■■□□ 2.57
CHCHD4-202ENST00000396914 GAREM2Q75VX8 874 aa31.09■■■□□ 2.57
CHCHD4-202ENST00000396914 ZDHHC14Q8IZN3 488 aa31.09■■■□□ 2.57
CHCHD4-202ENST00000396914 NEK11Q8NG66 645 aa31.09■■■□□ 2.57
CHCHD4-202ENST00000396914 TFAP2BQ92481 460 aa31.09■■■□□ 2.57
CHCHD4-202ENST00000396914 SHC3Q92529 594 aa31.09■■■□□ 2.57
CHCHD4-202ENST00000396914 TRMT2BQ96GJ1 504 aaKnown RBP31.09■■■□□ 2.57
CHCHD4-202ENST00000396914 CSNK1G1Q9HCP0 422 aa31.09■■■□□ 2.57
CHCHD4-202ENST00000396914 RTN4Q9NQC3 1192 aaKnown RBP31.09■■■□□ 2.57
CHCHD4-202ENST00000396914 CNTN6Q9UQ52 1028 aa31.09■■■□□ 2.57
CHCHD4-202ENST00000396914 TEX33O43247 280 aa31.08■■■□□ 2.57
CHCHD4-202ENST00000396914 MICAL2O94851 1124 aa31.08■■■□□ 2.57
CHCHD4-202ENST00000396914 ZNF132P52740 706 aa31.08■■■□□ 2.57
CHCHD4-202ENST00000396914 POLR2FP61218 127 aaKnown RBP31.08■■■□□ 2.57
CHCHD4-202ENST00000396914 CYP4F8P98187 520 aa31.08■■■□□ 2.57
CHCHD4-202ENST00000396914 FANCCQ00597 558 aa31.08■■■□□ 2.57
CHCHD4-202ENST00000396914 DRAP1Q14919 205 aaPredicted RBP31.08■■■□□ 2.57
CHCHD4-202ENST00000396914 DPY19L2P1Q6NXN4 242 aa31.08■■■□□ 2.57
CHCHD4-202ENST00000396914 ANKRD52Q8NB46 1076 aa31.08■■■□□ 2.57
CHCHD4-202ENST00000396914 ZMIZ2Q8NF64 920 aa31.08■■■□□ 2.57
CHCHD4-202ENST00000396914 ST13P5Q8NFI4 369 aaPredicted RBP31.08■■■□□ 2.57
CHCHD4-202ENST00000396914 IL21Q9HBE4 155 aa31.08■■■□□ 2.57
CHCHD4-202ENST00000396914 CD320Q9NPF0 282 aa31.08■■■□□ 2.57
CHCHD4-202ENST00000396914 SIK3Q9Y2K2 1263 aa31.08■■■□□ 2.57
CHCHD4-202ENST00000396914 NRG2O14511 850 aaPredicted RBP31.07■■■□□ 2.57
CHCHD4-202ENST00000396914 MOSPD3O75425 235 aa31.07■■■□□ 2.57
CHCHD4-202ENST00000396914 RTN3O95197 1032 aaPredicted RBP31.07■■■□□ 2.57
CHCHD4-202ENST00000396914 GNA15P30679 374 aa31.07■■■□□ 2.57
CHCHD4-202ENST00000396914 SLC5A3P53794 718 aa31.07■■■□□ 2.57
CHCHD4-202ENST00000396914 GPR158Q5T848 1215 aa31.07■■■□□ 2.57
CHCHD4-202ENST00000396914 UBA3Q8TBC4 463 aa31.07■■■□□ 2.57
CHCHD4-202ENST00000396914 MYRFLQ96LU7 910 aa31.07■■■□□ 2.57
CHCHD4-202ENST00000396914 GDE1Q9NZC3 331 aa31.07■■■□□ 2.57
CHCHD4-202ENST00000396914 EPS15L1Q9UBC2 864 aa31.07■■■□□ 2.57
CHCHD4-202ENST00000396914 A0A0C4DFX4 3053 aa31.07■■■□□ 2.56
CHCHD4-202ENST00000396914 O00370 1275 aa31.07■■■□□ 2.56
CHCHD4-202ENST00000396914 FOXN3O00409 490 aaPredicted RBP31.07■■■□□ 2.56
CHCHD4-202ENST00000396914 CYP26A1O43174 497 aa31.07■■■□□ 2.56
CHCHD4-202ENST00000396914 THAP12O43422 761 aa31.07■■■□□ 2.56
CHCHD4-202ENST00000396914 PNMA6AP0CW24 399 aaPredicted RBP31.07■■■□□ 2.56
CHCHD4-202ENST00000396914 YWHAQP27348 245 aa31.07■■■□□ 2.56
CHCHD4-202ENST00000396914 BCAT1P54687 386 aa31.07■■■□□ 2.56
CHCHD4-202ENST00000396914 PTPN21Q16825 1174 aa31.07■■■□□ 2.56
CHCHD4-202ENST00000396914 SCAMP5Q8TAC9 235 aa31.07■■■□□ 2.56
CHCHD4-202ENST00000396914 MRPS31Q92665 395 aaKnown RBP31.07■■■□□ 2.56
CHCHD4-202ENST00000396914 NAP1L5Q96NT1 182 aaPredicted RBP31.07■■■□□ 2.56
CHCHD4-202ENST00000396914 ERGIC2Q96RQ1 377 aa31.07■■■□□ 2.56
CHCHD4-202ENST00000396914 NLRC4Q9NPP4 1024 aa31.07■■■□□ 2.56
CHCHD4-202ENST00000396914 M0QYV0 167 aa31.06■■■□□ 2.56
CHCHD4-202ENST00000396914 ABL1P00519 1130 aa31.06■■■□□ 2.56
CHCHD4-202ENST00000396914 F11P03951 625 aa31.06■■■□□ 2.56
CHCHD4-202ENST00000396914 STILQ15468 1287 aa31.06■■■□□ 2.56
CHCHD4-202ENST00000396914 STXBP5Q5T5C0 1151 aa31.06■■■□□ 2.56
CHCHD4-202ENST00000396914 RNF135Q8IUD6 432 aa31.06■■■□□ 2.56
CHCHD4-202ENST00000396914 FBXO32Q969P5 355 aa31.06■■■□□ 2.56
CHCHD4-202ENST00000396914 SLITRK1Q96PX8 696 aa31.06■■■□□ 2.56
CHCHD4-202ENST00000396914 COL25A1Q9BXS0 654 aaPredicted RBP31.06■■■□□ 2.56
CHCHD4-202ENST00000396914 GANQ9H2C0 597 aa31.06■■■□□ 2.56
CHCHD4-202ENST00000396914 A0A1B0GTH6 734 aa31.05■■■□□ 2.56
CHCHD4-202ENST00000396914 MED7O43513 233 aa31.05■■■□□ 2.56
CHCHD4-202ENST00000396914 UBASH3AP57075 661 aa31.05■■■□□ 2.56
CHCHD4-202ENST00000396914 PTK2Q05397 1052 aa31.05■■■□□ 2.56
CHCHD4-202ENST00000396914 BST2Q10589 180 aaKnown RBP31.05■■■□□ 2.56
CHCHD4-202ENST00000396914 TAF10Q12962 218 aa31.05■■■□□ 2.56
CHCHD4-202ENST00000396914 CNGA2Q16280 664 aa31.05■■■□□ 2.56
CHCHD4-202ENST00000396914 LCLAT1Q6UWP7 414 aa31.05■■■□□ 2.56
CHCHD4-202ENST00000396914 TTC30AQ86WT1 665 aa31.05■■■□□ 2.56
CHCHD4-202ENST00000396914 ZSWIM3Q96MP5 696 aa31.05■■■□□ 2.56
CHCHD4-202ENST00000396914 SPAG5Q96R06 1193 aa31.05■■■□□ 2.56
CHCHD4-202ENST00000396914 STK33Q9BYT3 514 aa31.05■■■□□ 2.56
CHCHD4-202ENST00000396914 GPR88Q9GZN0 384 aa31.05■■■□□ 2.56
CHCHD4-202ENST00000396914 TRPC7Q9HCX4 862 aa31.05■■■□□ 2.56
CHCHD4-202ENST00000396914 ACP6Q9NPH0 428 aa31.05■■■□□ 2.56
CHCHD4-202ENST00000396914 TRPM5Q9NZQ8 1165 aa31.05■■■□□ 2.56
CHCHD4-202ENST00000396914 WDR3Q9UNX4 943 aaKnown RBP eCLIP31.05■■■□□ 2.56
CHCHD4-202ENST00000396914 ASGR2P07307 311 aa31.04■■■□□ 2.56
CHCHD4-202ENST00000396914 PDE4CQ08493 712 aa31.04■■■□□ 2.56
CHCHD4-202ENST00000396914 ZSWIM1Q9BR11 485 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms