RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 EIF3LQ9Y262 564 aaKnown RBP16.24■□□□□ 0.19
GNE-202ENST00000396594 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.24■□□□□ 0.19
GNE-202ENST00000396594 FRMD3A2A2Y4 597 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 TFRCP02786 760 aaKnown RBP16.23■□□□□ 0.19
GNE-202ENST00000396594 THPOP40225 353 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 BBS7Q8IWZ6 715 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 SERPINB11Q96P15 392 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 RUSC1Q9BVN2 902 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 CCDC134Q9H6E4 229 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 PCDHB5Q9Y5E4 795 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 RICTORQ6R327 1708 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 A0A087WWV3 80 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 ERI2A8K979 691 aaKnown RBP16.23■□□□□ 0.19
GNE-202ENST00000396594 STK25O00506 426 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 CYB561D2O14569 222 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 AMHP03971 560 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 SLC9A1P19634 815 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 MAPK8P45983 427 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 FXR1P51114 621 aaKnown RBP eCLIP16.23■□□□□ 0.19
GNE-202ENST00000396594 SESN2P58004 480 aaPredicted RBP16.23■□□□□ 0.19
GNE-202ENST00000396594 EZH2Q15910 746 aaKnown RBP16.23■□□□□ 0.19
GNE-202ENST00000396594 COBLL1Q53SF7 1204 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 SMYD5Q6GMV2 418 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 PALB2Q86YC2 1186 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 XPO6Q96QU8 1125 aaKnown RBP16.23■□□□□ 0.19
GNE-202ENST00000396594 BATF3Q9NR55 127 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 CDV3Q9UKY7 258 aaKnown RBP16.23■□□□□ 0.19
GNE-202ENST00000396594 SHOC2Q9UQ13 582 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 BCL9LQ86UU0 1499 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 EVPLLA8MZ36 301 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 KRT8P05787 483 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 CXCL9Q07325 125 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 CLEC16AQ2KHT3 1053 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 PAPD7Q5XG87 772 aaKnown RBP16.23■□□□□ 0.19
GNE-202ENST00000396594 FBXO32Q969P5 355 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 IL17RAQ96F46 866 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 PDGFCQ9NRA1 345 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 ANKRD6Q9Y2G4 727 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 O00370 1275 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 IFNA14P01570 189 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 MPOP05164 745 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 CYP11B1P15538 503 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 SHMT1P34896 483 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 TUFMP49411 452 aaKnown RBP16.23■□□□□ 0.19
GNE-202ENST00000396594 SKOR1P84550 965 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 AP1ARQ63HQ0 302 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 BRSK2Q8IWQ3 736 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 SCHIP1Q9P0W5 487 aaPredicted RBP16.23■□□□□ 0.19
GNE-202ENST00000396594 CRLS1Q9UJA2 301 aa16.23■□□□□ 0.19
GNE-202ENST00000396594 CYP3A7-CYP3A51PA0A087WV96 503 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 A0A087WZ62 844 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 TM9SF1O15321 606 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 ASMTLO95671 621 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 CYP3A7P24462 503 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 PIK3CGP48736 1102 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 PSEN1P49768 467 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 KCNK10P57789 538 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 SMARCB1Q12824 385 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 MAD2L1Q13257 205 aaPredicted RBP16.22■□□□□ 0.19
GNE-202ENST00000396594 ADRM1Q16186 407 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 FBXO47Q5MNV8 452 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 RETSATQ6NUM9 610 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 DDX42Q86XP3 938 aaKnown RBP eCLIP16.22■□□□□ 0.19
GNE-202ENST00000396594 LRRC1Q9BTT6 524 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 FTHL17Q9BXU8 183 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 MED24O75448 989 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 BMP10O95393 424 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 NPY2RP49146 381 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 ADCY1Q08828 1119 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 CACHD1Q5VU97 1274 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 MSL3Q8N5Y2 521 aaKnown RBP16.22■□□□□ 0.19
GNE-202ENST00000396594 PABPC5Q96DU9 382 aaKnown RBP16.22■□□□□ 0.19
GNE-202ENST00000396594 PHACTR1Q9C0D0 580 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 SPDYE5A6NIY4 337 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 SLC37A4O43826 429 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 TRPA1O75762 1119 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 FGF19O95750 216 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 CTSHP09668 335 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 RARGP13631 454 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 ALDH5A1P51649 535 aaPredicted RBP16.22■□□□□ 0.19
GNE-202ENST00000396594 PTPN11Q06124 597 aaPredicted RBP16.22■□□□□ 0.19
GNE-202ENST00000396594 SPDYE7PQ495Y7 208 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 DSG4Q86SJ6 1040 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 LRRC39Q96DD0 335 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 TASP1Q9H6P5 420 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 CD274Q9NZQ7 290 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.22■□□□□ 0.19
GNE-202ENST00000396594 RGS7P49802 495 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 ITIH4Q14624 930 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 ZC2HC1CQ53FD0 456 aaPredicted RBP16.22■□□□□ 0.19
GNE-202ENST00000396594 TAGAPQ8N103 731 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 BSNDQ8WZ55 320 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 ANKRD27Q96NW4 1050 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 RUBCNLQ9H714 662 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 STARD7Q9NQZ5 370 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 DOLKQ9UPQ8 538 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 MROH7Q68CQ1 1323 aa16.22■□□□□ 0.19
GNE-202ENST00000396594 DYRK3O43781 588 aa16.21■□□□□ 0.19
GNE-202ENST00000396594 VPS4BO75351 444 aa16.21■□□□□ 0.19
GNE-202ENST00000396594 ZNF284Q2VY69 593 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms