RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 CMASQ8NFW8 434 aaPredicted RBP16.93■□□□□ 0.3
SNX6-202ENST00000396526 UHMK1Q8TAS1 419 aaKnown RBP16.93■□□□□ 0.3
SNX6-202ENST00000396526 ZSWIM8A7E2V4 1837 aa16.93■□□□□ 0.3
SNX6-202ENST00000396526 ANK1P16157 1881 aa16.93■□□□□ 0.3
SNX6-202ENST00000396526 ACSL3O95573 720 aa16.93■□□□□ 0.3
SNX6-202ENST00000396526 TRUB2O95900 331 aaKnown RBP16.93■□□□□ 0.3
SNX6-202ENST00000396526 LSP1P33241 339 aa16.93■□□□□ 0.3
SNX6-202ENST00000396526 SLC6A3Q01959 620 aa16.93■□□□□ 0.3
SNX6-202ENST00000396526 GPS1Q13098 491 aa16.93■□□□□ 0.3
SNX6-202ENST00000396526 FAM47CQ5HY64 1035 aa16.93■□□□□ 0.3
SNX6-202ENST00000396526 SCYL2Q6P3W7 929 aa16.93■□□□□ 0.3
SNX6-202ENST00000396526 RHBDF2Q6PJF5 856 aa16.93■□□□□ 0.3
SNX6-202ENST00000396526 HAUS1Q96CS2 278 aa16.93■□□□□ 0.3
SNX6-202ENST00000396526 FAM107BQ9H098 131 aa16.93■□□□□ 0.3
SNX6-202ENST00000396526 PCDH9Q9HC56 1237 aa16.93■□□□□ 0.3
SNX6-202ENST00000396526 CAND2O75155 1236 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 ZNF200P98182 395 aaPredicted RBP16.92■□□□□ 0.3
SNX6-202ENST00000396526 GUCY1A3Q02108 690 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 PDE4CQ08493 712 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 BST2Q10589 180 aaKnown RBP16.92■□□□□ 0.3
SNX6-202ENST00000396526 TXNRD3NBQ6F5E7 133 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 FAM183BPQ6ZVS7 135 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 TTC25Q96NG3 672 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 NGRNQ9NPE2 291 aaKnown RBP16.92■□□□□ 0.3
SNX6-202ENST00000396526 GDAP2Q9NXN4 497 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 C2CD4BA6NLJ0 364 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 PIRO00625 290 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 DNALI1O14645 258 aaPredicted RBP16.92■□□□□ 0.3
SNX6-202ENST00000396526 CDH6P55285 790 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 MORF4L2Q15014 288 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 PDK2Q15119 407 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 B4GALNT4Q76KP1 1039 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 TMEM130Q8N3G9 435 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 ANKRD52Q8NB46 1076 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 ACTL9Q8TC94 416 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 CFAP57Q96MR6 1250 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 SERPINB12Q96P63 405 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 TBCBQ99426 244 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 SLC4A5Q9BY07 1137 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 CYLDQ9NQC7 956 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 IPPQ9Y573 584 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 SHBGP04278 402 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 OTUD4Q01804 1114 aaKnown RBP16.92■□□□□ 0.3
SNX6-202ENST00000396526 TMEM110Q86TL2 294 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 CRYBG2Q8N1P7 616 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 EPN3Q9H201 632 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 PRDM4Q9UKN5 801 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 TRPV2Q9Y5S1 764 aa16.92■□□□□ 0.3
SNX6-202ENST00000396526 SMAPO00193 183 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 PDGFRBP09619 1106 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 RARBP10826 455 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 KLRC2P26717 231 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 MRPS6P82932 125 aaKnown RBP16.91■□□□□ 0.3
SNX6-202ENST00000396526 CRHR2Q13324 411 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 CDO1Q16878 200 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 SOWAHAQ2M3V2 549 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 RBM15Q96T37 977 aaKnown RBP eCLIP16.91■□□□□ 0.3
SNX6-202ENST00000396526 NEU2Q9Y3R4 380 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 FAM163BP0C2L3 166 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 ZCCHC9Q8N567 271 aaKnown RBP16.91■□□□□ 0.3
SNX6-202ENST00000396526 TMEM40Q8WWA1 233 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 TLCD1Q96CP7 247 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 SELENOSQ9BQE4 189 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 ABT1Q9ULW3 272 aaKnown RBP16.91■□□□□ 0.3
SNX6-202ENST00000396526 APOC4-APOC2K7ER74 178 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 PIK3R2O00459 728 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 PPEF2O14830 753 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 CA12O43570 354 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 APOC2P02655 101 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 IL1R2P27930 398 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 KYNUQ16719 465 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 MICALCLQ6ZW33 695 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 SLC35B2Q8TB61 432 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 SLC35F5Q8WV83 523 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 P3H4Q92791 437 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 HSFY1Q96LI6 401 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 EPB41L4BQ9H329 900 aa16.91■□□□□ 0.3
SNX6-202ENST00000396526 DOCK3Q8IZD9 2030 aa16.9■□□□□ 0.3
SNX6-202ENST00000396526 ALDH1A1P00352 501 aa16.9■□□□□ 0.3
SNX6-202ENST00000396526 STIP1P31948 543 aaKnown RBP16.9■□□□□ 0.3
SNX6-202ENST00000396526 GJA9P57773 515 aa16.9■□□□□ 0.3
SNX6-202ENST00000396526 IRX5P78411 483 aaPredicted RBP16.9■□□□□ 0.3
SNX6-202ENST00000396526 ATP11AP98196 1134 aa16.9■□□□□ 0.3
SNX6-202ENST00000396526 STAT4Q14765 748 aa16.9■□□□□ 0.3
SNX6-202ENST00000396526 OASLQ15646 514 aaKnown RBP16.9■□□□□ 0.3
SNX6-202ENST00000396526 XKR4Q5GH76 650 aa16.9■□□□□ 0.3
SNX6-202ENST00000396526 HIBCHQ6NVY1 386 aaPredicted RBP16.9■□□□□ 0.3
SNX6-202ENST00000396526 PMF1Q6P1K2 205 aa16.9■□□□□ 0.3
SNX6-202ENST00000396526 PAXIP1Q6ZW49 1069 aaPredicted RBP16.9■□□□□ 0.3
SNX6-202ENST00000396526 CENPUQ71F23 418 aa16.9■□□□□ 0.3
SNX6-202ENST00000396526 TOP6BLQ8N6T0 577 aa16.9■□□□□ 0.3
SNX6-202ENST00000396526 CHST12Q9NRB3 414 aa16.9■□□□□ 0.3
SNX6-202ENST00000396526 SHOC2Q9UQ13 582 aa16.9■□□□□ 0.3
SNX6-202ENST00000396526 GRAP2O75791 330 aa16.9■□□□□ 0.3
SNX6-202ENST00000396526 ADORA2BP29275 332 aa16.9■□□□□ 0.3
SNX6-202ENST00000396526 PSMC4P43686 418 aa16.9■□□□□ 0.3
SNX6-202ENST00000396526 EIF3EP60228 445 aaKnown RBP16.9■□□□□ 0.3
SNX6-202ENST00000396526 ANKS1BQ7Z6G8 1248 aa16.9■□□□□ 0.3
SNX6-202ENST00000396526 ADGRF2Q8IZF7 708 aa16.9■□□□□ 0.3
SNX6-202ENST00000396526 TMEM121Q9BTD3 319 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms