RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 LCP1P13796 627 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 RNASELQ05823 741 aaKnown RBP12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 TRPM8Q7Z2W7 1104 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 GLIS1Q8NBF1 620 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 ZC3H15Q8WU90 426 aaKnown RBP12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 MED10Q9BTT4 135 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 MAD1L1Q9Y6D9 718 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 ZBTB42B2RXF5 422 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 MYL3P08590 195 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 CYP2C9P11712 490 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 KLRC2P26717 231 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 ITIH4Q14624 930 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 NOTUMQ6P988 496 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 FBF1Q8TES7 1133 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 TWNKQ96RR1 684 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 GPATCH2LQ9NWQ4 482 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 SENP1Q9P0U3 644 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 SIX4Q9UIU6 781 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 CHMP2BQ9UQN3 213 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 ATXN2Q99700 1313 aaKnown RBP12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 RRN3P2A6NIE6 340 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 MT-ND3P03897 115 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 CREB1P16220 341 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 IVDP26440 423 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 GCLCP48506 637 aaPredicted RBP12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 C15orf59Q2T9L4 293 aaPredicted RBP12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 SLC10A6Q3KNW5 377 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 ANKRD20A8PQ5CZ79 823 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 RHBDF2Q6PJF5 856 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 TMEM130Q8N3G9 435 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 C12orf29Q8N999 325 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 OSMRQ99650 979 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 DHX35Q9H5Z1 703 aaKnown RBP12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 PTPRHQ9HD43 1115 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 RNF19AQ9NV58 838 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 HAUS2Q9NVX0 235 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 SOCS7O14512 581 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 PROZP22891 400 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 BBS12Q6ZW61 710 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 NIPA2Q8N8Q9 360 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 FBXO36Q8NEA4 188 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 ATXN2LQ8WWM7 1075 aaKnown RBP12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 KLC2Q9H0B6 622 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 AP5M1Q9H0R1 490 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 RAB6BQ9NRW1 208 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 BAIAP2L1Q9UHR4 511 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 LOC102724159A0A0B4J2E5 919 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 BANF1O75531 89 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 FSBPO95073 299 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 MAP3K6O95382 1288 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 TRUB2O95900 331 aaKnown RBP12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 CD48P09326 243 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 SCTRP47872 440 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 GTF2A1P52655 376 aaPredicted RBP12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 GEMIN4P57678 1058 aaKnown RBP12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 ZNF252P-AS1Q0IIN9 211 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 ACAP1Q15027 740 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 PWP2Q15269 919 aaKnown RBP12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 CASC4Q6P4E1 433 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 DRICH1Q6PGQ1 229 aaPredicted RBP12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 FAM183BPQ6ZVS7 135 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 TBC1D1Q86TI0 1168 aaPredicted RBP12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 FAM172AQ8WUF8 416 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 PARK7Q99497 189 aaKnown RBP12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 SDCBP2Q9H190 292 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 KLK14Q9P0G3 267 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 SMG5Q9UPR3 1016 aaKnown RBP12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 C2CD2Q9Y426 696 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 DNAJC25-GNG10A0A024R161 153 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 APOC4-APOC2K7ER74 178 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 APOC2P02655 101 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 STIP1P31948 543 aaKnown RBP12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 ZNF143P52747 638 aaPredicted RBP12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 CDC42EP1Q00587 391 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 LGSNQ5TDP6 509 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 MAP1SQ66K74 1059 aaPredicted RBP12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 ZNF410Q86VK4 478 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 UBR7Q8N806 425 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 FNIP1Q8TF40 1166 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 NKD2Q969F2 451 aaPredicted RBP12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 BCO2Q9BYV7 579 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 ARL2BPQ9Y2Y0 163 aa12.09□□□□□ -0.47
PDXDC1-202ENST00000396410 GOLGA8RI6L899 631 aa12.08□□□□□ -0.48
PDXDC1-202ENST00000396410 FAM189A1O60320 539 aa12.08□□□□□ -0.48
PDXDC1-202ENST00000396410 TSPAN1O60635 241 aa12.08□□□□□ -0.48
PDXDC1-202ENST00000396410 HUS1O60921 280 aa12.08□□□□□ -0.48
PDXDC1-202ENST00000396410 ABHD2P08910 425 aa12.08□□□□□ -0.48
PDXDC1-202ENST00000396410 IQCF3P0C7M6 154 aa12.08□□□□□ -0.48
PDXDC1-202ENST00000396410 CDH5P33151 784 aaPredicted RBP12.08□□□□□ -0.48
PDXDC1-202ENST00000396410 ACVR2BQ13705 512 aa12.08□□□□□ -0.48
PDXDC1-202ENST00000396410 SNCBQ16143 134 aa12.08□□□□□ -0.48
PDXDC1-202ENST00000396410 BOLA3Q53S33 107 aa12.08□□□□□ -0.48
PDXDC1-202ENST00000396410 ILDR2Q71H61 639 aa12.08□□□□□ -0.48
PDXDC1-202ENST00000396410 ANKS1BQ7Z6G8 1248 aa12.08□□□□□ -0.48
PDXDC1-202ENST00000396410 PLEKHH3Q7Z736 793 aa12.08□□□□□ -0.48
PDXDC1-202ENST00000396410 NT5DC4Q86YG4 428 aa12.08□□□□□ -0.48
PDXDC1-202ENST00000396410 SCUBE3Q8IX30 993 aa12.08□□□□□ -0.48
PDXDC1-202ENST00000396410 C2orf69Q8N8R5 385 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms