RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 FAM228AQ86W67 206 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 SMG8Q8ND04 991 aaKnown RBP15.69■□□□□ 0.1
CBX3-202ENST00000396386 RXFP2Q8WXD0 754 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 PGM2Q96G03 612 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 SLC4A5Q9BY07 1137 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 FOXP3Q9BZS1 431 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 RNF39Q9H2S5 420 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 LRRC4CQ9HCJ2 640 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 RNF19AQ9NV58 838 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 GDAP2Q9NXN4 497 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 PCSK1NQ9UHG2 260 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 TRPV2Q9Y5S1 764 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 TLL2Q9Y6L7 1015 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 KPNA7A9QM74 516 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 PDGFRAP16234 1089 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 DESP17661 470 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 MDH1P40925 334 aaKnown RBP15.69■□□□□ 0.1
CBX3-202ENST00000396386 BCAT1P54687 386 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 FCGRTP55899 365 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 MAGOHP61326 146 aaKnown RBP15.69■□□□□ 0.1
CBX3-202ENST00000396386 DYNLT1P63172 113 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 UBAP2Q5T6F2 1119 aaKnown RBP15.69■□□□□ 0.1
CBX3-202ENST00000396386 HIBCHQ6NVY1 386 aaPredicted RBP15.69■□□□□ 0.1
CBX3-202ENST00000396386 OLFML1Q6UWY5 402 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 KCTD6Q8NC69 237 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 SLC35B2Q8TB61 432 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 KBTBD7Q8WVZ9 684 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 HSPH1Q92598 858 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 PIWIL1Q96J94 861 aaKnown RBP15.69■□□□□ 0.1
CBX3-202ENST00000396386 SNX25Q9H3E2 840 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 TULP2O00295 520 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 DNALI1O14645 258 aaPredicted RBP15.68■□□□□ 0.1
CBX3-202ENST00000396386 CST8O60676 142 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 ARSEP51690 589 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 CDR1P51861 262 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 GUCY1A3Q02108 690 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 BST2Q10589 180 aaKnown RBP15.68■□□□□ 0.1
CBX3-202ENST00000396386 SKIDA1Q1XH10 827 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 GNASQ5JWF2 1037 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 C6orf118Q5T5N4 469 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 TRNP1Q6NT89 227 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 PMF1Q6P1K2 205 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 RSPH3Q86UC2 560 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 RFX6Q8HWS3 928 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 ZDHHC17Q8IUH5 632 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 APPL2Q8NEU8 664 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 CMASQ8NFW8 434 aaPredicted RBP15.68■□□□□ 0.1
CBX3-202ENST00000396386 UHMK1Q8TAS1 419 aaKnown RBP15.68■□□□□ 0.1
CBX3-202ENST00000396386 STK32AQ8WU08 396 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 SLC35F5Q8WV83 523 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 PEBP4Q96S96 227 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 DDX23Q9BUQ8 820 aaKnown RBP15.68■□□□□ 0.1
CBX3-202ENST00000396386 STMN4Q9H169 189 aaPredicted RBP15.68■□□□□ 0.1
CBX3-202ENST00000396386 UPF3AQ9H1J1 476 aaKnown RBP15.68■□□□□ 0.1
CBX3-202ENST00000396386 DPEP3Q9H4B8 488 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 PCDH9Q9HC56 1237 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 GTF2IRD1Q9UHL9 959 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 CDY2AQ9Y6F7 541 aa15.68■□□□□ 0.1
CBX3-202ENST00000396386 SGK1O00141 431 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 SPTLC1O15269 473 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 RGS16O15492 202 aaPredicted RBP15.67■□□□□ 0.1
CBX3-202ENST00000396386 CA12O43570 354 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 OTUD4Q01804 1114 aaKnown RBP15.67■□□□□ 0.1
CBX3-202ENST00000396386 SLC6A3Q01959 620 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 SOX4Q06945 474 aaPredicted RBP15.67■□□□□ 0.1
CBX3-202ENST00000396386 PDE4CQ08493 712 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 TMEM110Q86TL2 294 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 ADGRF2Q8IZF7 708 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 ZCCHC9Q8N567 271 aaKnown RBP15.67■□□□□ 0.1
CBX3-202ENST00000396386 ACTL9Q8TC94 416 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 EPS8L3Q8TE67 593 aaKnown RBP15.67■□□□□ 0.1
CBX3-202ENST00000396386 RSAD1Q9HA92 442 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 SPC25Q9HBM1 224 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 GOLGA2P5Q9HBQ8 144 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 SLC12A6Q9UHW9 1150 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 TLDC2A0PJX2 215 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 SMIM23A6NLE4 172 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 RASGRF2O14827 1237 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 PRPSAP2O60256 369 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 HUS1O60921 280 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 GRAP2O75791 330 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 ACSL3O95573 720 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 TTC4O95801 387 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 AGTP01019 485 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 CD48P09326 243 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 FGFR1P11362 822 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 CCDC130P13994 396 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 ADORA2BP29275 332 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 LSP1P33241 339 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 GNL1P36915 607 aaPredicted RBP15.67■□□□□ 0.1
CBX3-202ENST00000396386 PLCB3Q01970 1234 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 GPS1Q13098 491 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 C15orf59Q2T9L4 293 aaPredicted RBP15.67■□□□□ 0.1
CBX3-202ENST00000396386 PRUNE1Q86TP1 453 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 CRYBG2Q8N1P7 616 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 GLIS1Q8NBF1 620 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 ARRDC4Q8NCT1 418 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 TRIB2Q92519 343 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 CALN1Q9BXU9 219 aa15.67■□□□□ 0.1
CBX3-202ENST00000396386 ROPN1BQ9BZX4 212 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms