RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 ZNF180Q9UJW8 692 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 AGO2Q9UKV8 859 aaKnown RBP9.09□□□□□ -0.95
BDNF-204ENST00000395980 SORCS3Q9UPU3 1222 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 SIP14410 1827 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 B2RBV5 119 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 SPECC1L-ADORA2AF8WAN1 911 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 GOLGA8RI6L899 631 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 CSDE1O75534 798 aaKnown RBP9.09□□□□□ -0.95
BDNF-204ENST00000395980 TMEM63AO94886 807 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 LYNP07948 512 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 ANPEPP15144 967 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 AP3M2P53677 418 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 AAGABQ6PD74 315 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 PHC3Q8NDX5 983 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 DTX3LQ8TDB6 740 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 TTC17Q96AE7 1141 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 NGLY1Q96IV0 654 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 SERAC1Q96JX3 654 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 GORASP1Q9BQQ3 440 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 METTL5Q9NRN9 209 aaKnown RBP9.09□□□□□ -0.95
BDNF-204ENST00000395980 GINM1Q9NU53 330 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 NDE1Q9NXR1 346 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 XPO7Q9UIA9 1087 aaKnown RBP9.09□□□□□ -0.95
BDNF-204ENST00000395980 AGTPBP1Q9UPW5 1226 aa9.09□□□□□ -0.95
BDNF-204ENST00000395980 TBC1D12O60347 775 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 STBD1O95210 358 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 CCNFP41002 786 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 GAD2Q05329 585 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 HNRNPDQ14103 355 aaKnown RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 DBN1Q16643 649 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 TTC39BQ5VTQ0 682 aaPredicted RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 LMBRD2Q68DH5 695 aaPredicted RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 TXNRD3NBQ6F5E7 133 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 TTC7BQ86TV6 843 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.08□□□□□ -0.96
BDNF-204ENST00000395980 FAM151AQ8WW52 585 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 PPP2R3CQ969Q6 453 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 KLF6Q99612 283 aaPredicted RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 ECSITQ9BQ95 431 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 SIKE1Q9BRV8 207 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 ADAM33Q9BZ11 813 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 PPP1R12CQ9BZL4 782 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 XPNPEP1Q9NQW7 623 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 ZDHHC7Q9NXF8 308 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 PCDHGC3Q9UN70 934 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 WASF2Q9Y6W5 498 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 TCRBV9S1A1TA0A576 114 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 PDLIM1O00151 329 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 COPEO14579 308 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 PIM1P11309 404 aaPredicted RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 AMPD1P23109 780 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 EIF4BP23588 611 aaKnown RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 HMGB2P26583 209 aaKnown RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 GDF10P55107 478 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 NLRP11P59045 1033 aaKnown RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 RPL26P61254 145 aaKnown RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 SLC25A11Q02978 314 aaKnown RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 HADHQ16836 314 aaKnown RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 OLFM3Q96PB7 478 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 IMPG2Q9BZV3 1241 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 IQCGQ9H095 443 aaKnown RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 NUB1Q9Y5A7 615 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 PTPRJQ12913 1337 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 SPDYE2BA6NHP3 402 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 CST8O60676 142 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 SPDYE6P0CI01 402 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 PSMC4P43686 418 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 FAAP100Q0VG06 881 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 SPDYE2Q495Y8 402 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 ANGEL2Q5VTE6 544 aaKnown RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 RIPOR1Q6ZS17 1223 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 SLC26A11Q86WA9 606 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 RBM15BQ8NDT2 890 aaKnown RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 PRMT6Q96LA8 375 aaPredicted RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 VCX3BQ9H321 246 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 VCX3AQ9NNX9 186 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 RBAKQ9NYW8 714 aaPredicted RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 SIRPGQ9P1W8 387 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 TEX264Q9Y6I9 313 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 APOC4-APOC2K7ER74 178 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 MAFGO15525 162 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 RNF8O76064 485 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 APOC2P02655 101 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 PYGBP11216 843 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 POLE2P56282 527 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 XIAPP98170 497 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 LGSNQ5TDP6 509 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 ULK2Q8IYT8 1036 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 GPRASP2Q96D09 838 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 FAM84AQ96KN4 292 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 SRPK1Q96SB4 655 aaKnown RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 PDCD2LQ9BRP1 358 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 CENPKQ9BS16 269 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 C12orf65Q9H3J6 166 aaKnown RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 ALG13Q9NP73 1137 aaKnown RBP9.08□□□□□ -0.96
BDNF-204ENST00000395980 CHMP2BQ9UQN3 213 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 TBC1D30Q9Y2I9 924 aa9.08□□□□□ -0.96
BDNF-204ENST00000395980 H3BRJ5 948 aa9.07□□□□□ -0.96
BDNF-204ENST00000395980 CHADO15335 359 aa9.07□□□□□ -0.96
BDNF-204ENST00000395980 ZNF862O60290 1169 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms