RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 DDIT4Q9NX09 232 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 EIF3LQ9Y262 564 aaKnown RBP5.66□□□□□ -1.5
VPS13C-204ENST00000395898 DRG1Q9Y295 367 aaKnown RBP5.66□□□□□ -1.5
VPS13C-204ENST00000395898 SEC24DO94855 1032 aaPredicted RBP5.66□□□□□ -1.5
VPS13C-204ENST00000395898 ASS1P00966 412 aaKnown RBP5.66□□□□□ -1.5
VPS13C-204ENST00000395898 ALBP02768 609 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 GRK3P35626 688 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 NR2C2P49116 596 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 SERPINB8P50452 374 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 ERO1BQ86YB8 467 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 APLFQ8IW19 511 aaPredicted RBP5.66□□□□□ -1.5
VPS13C-204ENST00000395898 LRRC71Q8N4P6 559 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 ARRDC4Q8NCT1 418 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 LINC00116Q8NCU8 138 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 ACTRT1Q8TDG2 376 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 DPF2Q92785 391 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 ZNF333Q96JL9 665 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 ZCCHC17Q9NP64 241 aaKnown RBP5.66□□□□□ -1.5
VPS13C-204ENST00000395898 ALG13Q9NP73 1137 aaKnown RBP5.66□□□□□ -1.5
VPS13C-204ENST00000395898 ADARB2Q9NS39 739 aaKnown RBP5.66□□□□□ -1.5
VPS13C-204ENST00000395898 RPS6KL1Q9Y6S9 549 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 CEP170BQ9Y4F5 1589 aaPredicted RBP5.66□□□□□ -1.5
VPS13C-204ENST00000395898 ADCY3O60266 1144 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 RNASEH1O60930 286 aaKnown RBP5.66□□□□□ -1.5
VPS13C-204ENST00000395898 IMPDH2P12268 514 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 KLRC1P26715 233 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 MRPS15P82914 257 aaKnown RBP5.66□□□□□ -1.5
VPS13C-204ENST00000395898 AMPD2Q01433 879 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 C4orf33Q8N1A6 199 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 C9orf72Q96LT7 481 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 IRX2Q9BZI1 471 aaPredicted RBP5.66□□□□□ -1.5
VPS13C-204ENST00000395898 YIPF3Q9GZM5 350 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 RNF112Q9ULX5 631 aa5.66□□□□□ -1.5
VPS13C-204ENST00000395898 PPP1R3GB7ZBB8 358 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 AIM2O14862 343 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 RHOBTB1O94844 696 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 VDRP11473 427 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 RPL10AP62906 217 aaKnown RBP5.65□□□□□ -1.5
VPS13C-204ENST00000395898 CNTN1Q12860 1018 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 ITGA9Q13797 1035 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 MYBPC2Q14324 1141 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 WDR93Q6P2C0 686 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 EXD1Q8NHP7 514 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 TSEN34Q9BSV6 310 aaKnown RBP5.65□□□□□ -1.5
VPS13C-204ENST00000395898 EPS8L2Q9H6S3 715 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 CARNS1A5YM72 827 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 CAND2O75155 1236 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 NPM3O75607 178 aaKnown RBP5.65□□□□□ -1.5
VPS13C-204ENST00000395898 NPTXRO95502 500 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 HNRNPCP07910 306 aaKnown RBP eCLIP5.65□□□□□ -1.5
VPS13C-204ENST00000395898 CYTH1Q15438 398 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 LRRC8DQ7L1W4 858 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 CHSY1Q86X52 802 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 SLC20A1Q8WUM9 679 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 IL17RAQ96F46 866 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 KCTD10Q9H3F6 313 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 EFCAB1Q9HAE3 211 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 IMPAD1Q9NX62 359 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 RRN3Q9NYV6 651 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 SPASTQ9UBP0 616 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 CRLS1Q9UJA2 301 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 ANKRD65E5RJM6 399 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 STX7O15400 261 aaKnown RBP5.65□□□□□ -1.5
VPS13C-204ENST00000395898 CLK1P49759 484 aaKnown RBP5.65□□□□□ -1.5
VPS13C-204ENST00000395898 GEMP55040 296 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 TRIM60Q495X7 471 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 DENND1BQ6P3S1 775 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 MPZL3Q6UWV2 235 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 LONP2Q86WA8 852 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 FAM71DQ8N9W8 422 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 TRIM51Q9BSJ1 452 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 CYP3A43Q9HB55 503 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 EPB41L4AQ9HCS5 686 aaPredicted RBP5.65□□□□□ -1.5
VPS13C-204ENST00000395898 SCUBE2Q9NQ36 999 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 ABI2Q9NYB9 513 aaPredicted RBP5.65□□□□□ -1.5
VPS13C-204ENST00000395898 SLC39A10Q9ULF5 831 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 CEMIPQ8WUJ3 1361 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 SDR42E2A6NKP2 422 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 FBXO21O94952 628 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 CCDC159P0C7I6 412 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 SOX6P35712 828 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 MDH1BQ5I0G3 518 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 SYCP2LQ5T4T6 812 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 MROH9Q5TGP6 573 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 SRLQ86TD4 932 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 SLC13A5Q86YT5 568 aaPredicted RBP5.65□□□□□ -1.5
VPS13C-204ENST00000395898 TRIM48Q8IWZ4 208 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 ERP27Q96DN0 273 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 RMND5AQ9H871 391 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 LRRC40Q9H9A6 602 aa5.65□□□□□ -1.5
VPS13C-204ENST00000395898 MYO1GB0I1T2 1018 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 MSH4O15457 936 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 BRD2P25440 801 aaKnown RBP5.65□□□□□ -1.51
VPS13C-204ENST00000395898 ITIH4Q14624 930 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 CHI3L2Q15782 390 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 AGBL1Q96MI9 1066 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 PI4K2AQ9BTU6 479 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 FBXO44Q9H4M3 255 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 TBC1D23Q9NUY8 699 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 KBTBD4Q9NVX7 518 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms