RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 NEU2Q9Y3R4 380 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 RRN3P2A6NIE6 340 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 KIF1CO43896 1103 aaKnown RBP18.78■□□□□ 0.6
SREBF1-204ENST00000395756 TTC4O95801 387 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 CCDC130P13994 396 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 KLRC2P26717 231 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 CDH6P55285 790 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 GSCP56915 257 aaPredicted RBP18.78■□□□□ 0.6
SREBF1-204ENST00000395756 TTC30AQ86WT1 665 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 MYCBPAPQ8TBZ2 947 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 ZNF473Q8WTR7 871 aaKnown RBP18.78■□□□□ 0.6
SREBF1-204ENST00000395756 CLEC4CQ8WTT0 213 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 GNEQ9Y223 722 aaKnown RBP18.78■□□□□ 0.6
SREBF1-204ENST00000395756 HMGCRP04035 888 aa18.77■□□□□ 0.6
SREBF1-204ENST00000395756 C6orf222P0C671 652 aaPredicted RBP18.77■□□□□ 0.6
SREBF1-204ENST00000395756 DARSP14868 501 aaKnown RBP18.77■□□□□ 0.6
SREBF1-204ENST00000395756 ANKMY2Q8IV38 441 aa18.77■□□□□ 0.6
SREBF1-204ENST00000395756 ANKRD42Q8N9B4 389 aa18.77■□□□□ 0.6
SREBF1-204ENST00000395756 KAT6AQ92794 2004 aa18.77■□□□□ 0.6
SREBF1-204ENST00000395756 PEBP4Q96S96 227 aa18.77■□□□□ 0.6
SREBF1-204ENST00000395756 MAGEB5Q9BZ81 275 aa18.77■□□□□ 0.6
SREBF1-204ENST00000395756 CTSHP09668 335 aa18.77■□□□□ 0.6
SREBF1-204ENST00000395756 PECAM1P16284 738 aaPredicted RBP18.77■□□□□ 0.6
SREBF1-204ENST00000395756 ZNF268Q14587 947 aaPredicted RBP18.77■□□□□ 0.6
SREBF1-204ENST00000395756 QPCTQ16769 361 aa18.77■□□□□ 0.6
SREBF1-204ENST00000395756 C1orf228Q6PIY5 440 aa18.77■□□□□ 0.6
SREBF1-204ENST00000395756 NDRG1Q92597 394 aaKnown RBP18.77■□□□□ 0.6
SREBF1-204ENST00000395756 TLCD1Q96CP7 247 aa18.77■□□□□ 0.6
SREBF1-204ENST00000395756 ADAM7Q9H2U9 754 aa18.77■□□□□ 0.6
SREBF1-204ENST00000395756 DDX56Q9NY93 547 aaKnown RBP18.77■□□□□ 0.6
SREBF1-204ENST00000395756 SIP14410 1827 aa18.77■□□□□ 0.59
SREBF1-204ENST00000395756 F2P00734 622 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 PFKMP08237 780 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 KRT7P08729 469 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 LCP1P13796 627 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 TRMT10CQ7L0Y3 403 aaKnown RBP18.76■□□□□ 0.59
SREBF1-204ENST00000395756 FAM71DQ8N9W8 422 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 MAK16Q9BXY0 300 aaKnown RBP18.76■□□□□ 0.59
SREBF1-204ENST00000395756 AP5M1Q9H0R1 490 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 MGAMO43451 1857 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 GMNCA6NCL1 334 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 C3orf70A6NLC5 250 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-204ENST00000395756 SPTLC1O15269 473 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 ZNF865P0CJ78 1059 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-204ENST00000395756 PSEN2P49810 448 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 ATXN1P54253 815 aaKnown RBP18.76■□□□□ 0.59
SREBF1-204ENST00000395756 VCPP55072 806 aaKnown RBP18.76■□□□□ 0.59
SREBF1-204ENST00000395756 SNX17Q15036 470 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 PPP6R3Q5H9R7 873 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-204ENST00000395756 FAM47CQ5HY64 1035 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 LRRC38Q5VT99 294 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 TWF2Q6IBS0 349 aaKnown RBP18.76■□□□□ 0.59
SREBF1-204ENST00000395756 SYDE1Q6ZW31 735 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-204ENST00000395756 BEST2Q8NFU1 509 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 RSAD2Q8WXG1 361 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 ZFP42Q96MM3 310 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 POC1B-GALNT4F8VUJ3 575 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 TFE3P19532 575 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-204ENST00000395756 MNAT1P51948 309 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 RABGGTBP53611 331 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 SOWAHAQ2M3V2 549 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 ZC3H12AQ5D1E8 599 aaKnown RBP18.76■□□□□ 0.59
SREBF1-204ENST00000395756 CYP4X1Q8N118 509 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 ALLCQ8N6M5 410 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 ARHGEF2Q92974 986 aaKnown RBP18.76■□□□□ 0.59
SREBF1-204ENST00000395756 SNX27Q96L92 541 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 PRMT1Q99873 361 aaKnown RBP18.76■□□□□ 0.59
SREBF1-204ENST00000395756 HESX1Q9UBX0 185 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 HEY1Q9Y5J3 304 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 FAM169AQ9Y6X4 670 aa18.76■□□□□ 0.59
SREBF1-204ENST00000395756 SYNJ2BP-COX16A0A087WUM0 186 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 SMIM28A0A1B0GU29 152 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 MYADML2A6NDP7 307 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 MEIS3P2A8K0S8 358 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 MAGEA4P43358 317 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 DCAF4L1Q3SXM0 396 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 RNF187Q5TA31 235 aaPredicted RBP18.75■□□□□ 0.59
SREBF1-204ENST00000395756 CPLX4Q7Z7G2 160 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 ZBED8Q8IZ13 594 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 COX16Q9P0S2 106 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 WDR35Q9P2L0 1181 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 TNPO2O14787 897 aaKnown RBP18.75■□□□□ 0.59
SREBF1-204ENST00000395756 GPD1P21695 349 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 ACAT1P24752 427 aaKnown RBP18.75■□□□□ 0.59
SREBF1-204ENST00000395756 FKBP1BP68106 108 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 NBPF20Q3BBV1 942 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 LCLAT1Q6UWP7 414 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 EXOC3L1Q86VI1 746 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 UNC45BQ8IWX7 931 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 NIPA2Q8N8Q9 360 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 MCRS1Q96EZ8 462 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 VPS37BQ9H9H4 285 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 ASNSD1Q9NWL6 643 aa18.75■□□□□ 0.59
SREBF1-204ENST00000395756 PRPSAP2O60256 369 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 ATP2C2O75185 946 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 TRUB2O95900 331 aaKnown RBP18.74■□□□□ 0.59
SREBF1-204ENST00000395756 PGK1P00558 417 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 SOX4Q06945 474 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-204ENST00000395756 C9orf57Q5W0N0 161 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 SPATA18Q8TC71 538 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms