RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 KRT12Q99456 494 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 MIS12Q9H081 205 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 MARCH5Q9NX47 278 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 TRIOBPQ9H2D6 2365 aa20.33■□□□□ 0.85
LMNB1-202ENST00000395354 GOLGA6L10A0A0M3HER8 536 aa20.33■□□□□ 0.84
LMNB1-202ENST00000395354 A0A1W2PPC1 479 aa20.33■□□□□ 0.84
LMNB1-202ENST00000395354 PSTPIP1O43586 416 aa20.33■□□□□ 0.84
LMNB1-202ENST00000395354 BMPR1AP36894 532 aa20.33■□□□□ 0.84
LMNB1-202ENST00000395354 GABRB2P47870 512 aa20.33■□□□□ 0.84
LMNB1-202ENST00000395354 ZNF268Q14587 947 aaPredicted RBP20.33■□□□□ 0.84
LMNB1-202ENST00000395354 PRPF38BQ5VTL8 546 aaKnown RBP20.33■□□□□ 0.84
LMNB1-202ENST00000395354 TMEM173Q86WV6 379 aaPredicted RBP20.33■□□□□ 0.84
LMNB1-202ENST00000395354 C18orf8Q96DM3 657 aa20.33■□□□□ 0.84
LMNB1-202ENST00000395354 IGSF21Q96ID5 467 aa20.33■□□□□ 0.84
LMNB1-202ENST00000395354 MRPL45Q9BRJ2 306 aaKnown RBP20.33■□□□□ 0.84
LMNB1-202ENST00000395354 SPG21Q9NZD8 308 aa20.33■□□□□ 0.84
LMNB1-202ENST00000395354 ADAM28Q9UKQ2 775 aa20.33■□□□□ 0.84
LMNB1-202ENST00000395354 RWDD3Q9Y3V2 267 aa20.33■□□□□ 0.84
LMNB1-202ENST00000395354 ARHGEF15O94989 841 aa20.32■□□□□ 0.84
LMNB1-202ENST00000395354 PAX3P23760 479 aa20.32■□□□□ 0.84
LMNB1-202ENST00000395354 GPD2P43304 727 aa20.32■□□□□ 0.84
LMNB1-202ENST00000395354 BRCC3P46736 316 aa20.32■□□□□ 0.84
LMNB1-202ENST00000395354 SMAD3P84022 425 aaKnown RBP20.32■□□□□ 0.84
LMNB1-202ENST00000395354 SOWAHAQ2M3V2 549 aa20.32■□□□□ 0.84
LMNB1-202ENST00000395354 PTPN20Q4JDL3 420 aa20.32■□□□□ 0.84
LMNB1-202ENST00000395354 TIGD5Q53EQ6 642 aa20.32■□□□□ 0.84
LMNB1-202ENST00000395354 LLGL2Q6P1M3 1020 aa20.32■□□□□ 0.84
LMNB1-202ENST00000395354 PHLDB2Q86SQ0 1253 aa20.32■□□□□ 0.84
LMNB1-202ENST00000395354 IFT20Q8IY31 132 aa20.32■□□□□ 0.84
LMNB1-202ENST00000395354 SLC39A11Q8N1S5 342 aa20.32■□□□□ 0.84
LMNB1-202ENST00000395354 TRIM7Q9C029 511 aa20.32■□□□□ 0.84
LMNB1-202ENST00000395354 NKX2-4Q9H2Z4 354 aa20.32■□□□□ 0.84
LMNB1-202ENST00000395354 DMGDHQ9UI17 866 aaKnown RBP20.32■□□□□ 0.84
LMNB1-202ENST00000395354 SIGLEC16A6NMB1 481 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 M0QYV0 167 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 TRAPPC3O43617 180 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 SETSIPP0DME0 302 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 PPM1AP35813 382 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 MARCKSL1P49006 195 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 AARSP49588 968 aaKnown RBP eCLIP20.31■□□□□ 0.846e-7■■■■□ 19.6
LMNB1-202ENST00000395354 ZNF211Q13398 564 aaPredicted RBP20.31■□□□□ 0.84
LMNB1-202ENST00000395354 ORC1Q13415 861 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 PIGHQ14442 188 aaPredicted RBP20.31■□□□□ 0.84
LMNB1-202ENST00000395354 DSTYKQ6XUX3 929 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 RHOT1Q8IXI2 618 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 TOP6BLQ8N6T0 577 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 NIPA2Q8N8Q9 360 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 CCDC26Q8TAB7 109 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 BCL7CQ8WUZ0 217 aaPredicted RBP20.31■□□□□ 0.84
LMNB1-202ENST00000395354 TMEM169Q96HH4 297 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 SENP8Q96LD8 212 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 C17orf80Q9BSJ5 609 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 AP1M1Q9BXS5 423 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 SLC28A3Q9HAS3 691 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 CYTH4Q9UIA0 394 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 L1RE1Q9UN81 338 aa20.31■□□□□ 0.84
LMNB1-202ENST00000395354 I3L4J1 428 aa20.3■□□□□ 0.84
LMNB1-202ENST00000395354 SEC31AO94979 1220 aaKnown RBP20.3■□□□□ 0.84
LMNB1-202ENST00000395354 PYGMP11217 842 aa20.3■□□□□ 0.84
LMNB1-202ENST00000395354 CTNNB1P35222 781 aa20.3■□□□□ 0.84
LMNB1-202ENST00000395354 ARHGAP17Q68EM7 881 aa20.3■□□□□ 0.84
LMNB1-202ENST00000395354 DCUN1D2Q6PH85 259 aa20.3■□□□□ 0.84
LMNB1-202ENST00000395354 MAATS1Q7Z4T9 603 aa20.3■□□□□ 0.84
LMNB1-202ENST00000395354 KLHL7Q8IXQ5 586 aa20.3■□□□□ 0.84
LMNB1-202ENST00000395354 CRYBG2Q8N1P7 616 aa20.3■□□□□ 0.84
LMNB1-202ENST00000395354 EIF1ADQ8N9N8 165 aaKnown RBP20.3■□□□□ 0.84
LMNB1-202ENST00000395354 APPL2Q8NEU8 664 aa20.3■□□□□ 0.84
LMNB1-202ENST00000395354 FNIP1Q8TF40 1166 aa20.3■□□□□ 0.84
LMNB1-202ENST00000395354 HDAC7Q8WUI4 952 aa20.3■□□□□ 0.84
LMNB1-202ENST00000395354 TGS1Q96RS0 853 aaKnown RBP20.3■□□□□ 0.84
LMNB1-202ENST00000395354 GDF3Q9NR23 364 aa20.3■□□□□ 0.84
LMNB1-202ENST00000395354 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.3■□□□□ 0.84
LMNB1-202ENST00000395354 MTUS1Q9ULD2 1270 aa20.3■□□□□ 0.84
LMNB1-202ENST00000395354 SART1O43290 800 aaKnown RBP20.29■□□□□ 0.84
LMNB1-202ENST00000395354 DNAJB2P25686 324 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 KRT17Q04695 432 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 PDCLQ13371 301 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 LRIT3Q3SXY7 679 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 LRRC38Q5VT99 294 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 FUT10Q6P4F1 479 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 HDXQ7Z353 690 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 SPRED2Q7Z698 418 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 CPNE8Q86YQ8 564 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 KLHL23Q8NBE8 558 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 OR6B3Q8NGW1 331 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 IPO4Q8TEX9 1081 aaKnown RBP20.29■□□□□ 0.84
LMNB1-202ENST00000395354 MAIP1Q8WWC4 291 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 SUSD3Q96L08 255 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 FUT8Q9BYC5 575 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 GPR62Q9BZJ7 368 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 FAM53CQ9NYF3 392 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 TSPAN16Q9UKR8 245 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 KIAA1671Q9BY89 1806 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 M0QZQ0 153 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 CYB561D2O14569 222 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 RAD51CO43502 376 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 HUS1O60921 280 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 FGF18O76093 207 aa20.29■□□□□ 0.84
LMNB1-202ENST00000395354 HEXIM1O94992 359 aaKnown RBP20.29■□□□□ 0.84
LMNB1-202ENST00000395354 WARSP23381 471 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms