RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 CPA4Q9UI42 421 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 EFR3BQ9Y2G0 817 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 CST8O60676 142 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 CELF2O95319 508 aaKnown RBP14.65□□□□□ -0.06
SNCA-204ENST00000394989 OTUD4Q01804 1114 aaKnown RBP14.65□□□□□ -0.06
SNCA-204ENST00000394989 GPS1Q13098 491 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 GLRA4Q5JXX5 417 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 FAM183BPQ6ZVS7 135 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 CMASQ8NFW8 434 aaPredicted RBP14.65□□□□□ -0.06
SNCA-204ENST00000394989 TMEM40Q8WWA1 233 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 NXF3Q9H4D5 531 aaKnown RBP14.65□□□□□ -0.06
SNCA-204ENST00000394989 KLC4Q9NSK0 619 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 NRCAMQ92823 1304 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 MBLAC1A4D2B0 266 aaPredicted RBP14.64□□□□□ -0.07
SNCA-204ENST00000394989 SLC15A5A6NIM6 579 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 PECAM1P16284 738 aaPredicted RBP14.64□□□□□ -0.07
SNCA-204ENST00000394989 CCDC142Q17RM4 750 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 PKDCCQ504Y2 493 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 OLFML2BQ68BL8 750 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 ALKAL1Q6UXT8 129 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 CATSPER4Q7RTX7 472 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 TTC30AQ86WT1 665 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 CNPY4Q8N129 248 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 USP18Q9UMW8 372 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 SNX9Q9Y5X1 595 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 GOLGA6L7A0A1B0GV03 622 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 RRN3P2A6NIE6 340 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 C2CD4BA6NLJ0 364 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 TCEA3O75764 348 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 TRUB2O95900 331 aaKnown RBP14.64□□□□□ -0.07
SNCA-204ENST00000394989 ZNF143P52747 638 aaPredicted RBP14.64□□□□□ -0.07
SNCA-204ENST00000394989 MYO1EQ12965 1108 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 FASTKD3Q14CZ7 662 aaKnown RBP14.64□□□□□ -0.07
SNCA-204ENST00000394989 HADHQ16836 314 aaKnown RBP14.64□□□□□ -0.07
SNCA-204ENST00000394989 MORN1Q5T089 497 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 RNASEH2BQ5TBB1 312 aaKnown RBP14.64□□□□□ -0.07
SNCA-204ENST00000394989 BBS12Q6ZW61 710 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 B4GALNT4Q76KP1 1039 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 CYP4X1Q8N118 509 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 CCHCR1Q8TD31 782 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 ZNF317Q96PQ6 595 aaPredicted RBP14.64□□□□□ -0.07
SNCA-204ENST00000394989 GCOM2Q9BZD3 368 aaPredicted RBP14.64□□□□□ -0.07
SNCA-204ENST00000394989 PLEKHA5Q9HAU0 1116 aa14.64□□□□□ -0.07
SNCA-204ENST00000394989 DDX20Q9UHI6 824 aaKnown RBP14.64□□□□□ -0.07
SNCA-204ENST00000394989 CLGNO14967 610 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 MAGEA4P43358 317 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 ADAM17P78536 824 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 PLCB3Q01970 1234 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 C15orf59Q2T9L4 293 aaPredicted RBP14.63□□□□□ -0.07
SNCA-204ENST00000394989 PMF1Q6P1K2 205 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 HSPH1Q92598 858 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 LPIN3Q9BQK8 851 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 FAM124BQ9H5Z6 455 aaPredicted RBP14.63□□□□□ -0.07
SNCA-204ENST00000394989 TPX2Q9ULW0 747 aaKnown RBP14.63□□□□□ -0.07
SNCA-204ENST00000394989 PDCD11Q14690 1871 aaKnown RBP14.63□□□□□ -0.07
SNCA-204ENST00000394989 C5orf60A6NFR6 353 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 EIF4E1BA6NMX2 242 aaKnown RBP14.63□□□□□ -0.07
SNCA-204ENST00000394989 SGK1O00141 431 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 HCRTO43612 131 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 GRAP2O75791 330 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 GABBR2O75899 941 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 DARSP14868 501 aaKnown RBP14.63□□□□□ -0.07
SNCA-204ENST00000394989 CDC25CP30307 473 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 SPRED3Q2MJR0 410 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 GOLGA7BQ2TAP0 167 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 ACOT1Q86TX2 421 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 EURLQ9NYK6 297 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 DERAQ9Y315 318 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 TRIP12Q14669 1992 aaPredicted RBP14.63□□□□□ -0.07
SNCA-204ENST00000394989 SMIM35A0A1B0GVV1 85 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 IFNB1P01574 187 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 ZNF865P0CJ78 1059 aaPredicted RBP14.63□□□□□ -0.07
SNCA-204ENST00000394989 RGS7P49802 495 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 ACAP1Q15027 740 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 CCDC13Q8IYE1 715 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 C2orf69Q8N8R5 385 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 KCTD6Q8NC69 237 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 ARHGEF2Q92974 986 aaKnown RBP14.63□□□□□ -0.07
SNCA-204ENST00000394989 STMN4Q9H169 189 aaPredicted RBP14.63□□□□□ -0.07
SNCA-204ENST00000394989 PCDH9Q9HC56 1237 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 FAM49BQ9NUQ9 324 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 KIAA1257Q9ULG3 409 aa14.63□□□□□ -0.07
SNCA-204ENST00000394989 CYP2C9P11712 490 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 DRD4P21917 467 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 AKAP5P24588 427 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 ZNF200P98182 395 aaPredicted RBP14.62□□□□□ -0.07
SNCA-204ENST00000394989 GAD2Q05329 585 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 MMRN1Q13201 1228 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 NAA25Q14CX7 972 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 CCL14Q16627 93 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 NOTUMQ6P988 496 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 C6orf89Q6UWU4 347 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 VSTM1Q6UX27 236 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 TLK2Q86UE8 772 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 DNAJB3Q8WWF6 145 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 RXFP2Q8WXD0 754 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 KHSRPQ92945 711 aaKnown RBP eCLIP14.62□□□□□ -0.07
SNCA-204ENST00000394989 SLC5A4Q9NY91 659 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 CNTN3Q9P232 1028 aa14.62□□□□□ -0.07
SNCA-204ENST00000394989 FARP1Q9Y4F1 1045 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms