RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ZNF280DQ6N043 979 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 CCDC33Q8N5R6 958 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 C10orf53Q8N6V4 93 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 DTX3LQ8TDB6 740 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 JADE3Q92613 823 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 THAP2Q9H0W7 228 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 PNMA8BQ9ULN7 279 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-203ENST00000394872 PTPRUQ92729 1446 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 TBKBP1A7MCY6 615 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 RHOCP08134 193 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 TMC7Q7Z402 723 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 ADCK1Q86TW2 530 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 GMCL1P1Q8NEA9 526 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 RIN2Q8WYP3 895 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-203ENST00000394872 CYFIP2Q96F07 1278 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 DLC1Q96QB1 1528 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 NCF1BA6NI72 391 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-203ENST00000394872 NCF1CA8MVU1 366 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-203ENST00000394872 NCF1P14598 390 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-203ENST00000394872 RFX3P48380 749 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 CASP4P49662 377 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 SLC9A5Q14940 896 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 CHMP1BQ7LBR1 199 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 CBWD2Q8IUF1 395 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 SGSM3Q96HU1 749 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 KCNK16Q96T55 309 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 CGRRF1Q99675 332 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 AGO4Q9HCK5 861 aaKnown RBP10.77□□□□□ -0.69
COL4A6-203ENST00000394872 KIAA1257Q9ULG3 409 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 E9PCH4 1651 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 HNRNPRO43390 633 aaKnown RBP10.77□□□□□ -0.69
COL4A6-203ENST00000394872 PQBP1O60828 265 aaKnown RBP10.77□□□□□ -0.69
COL4A6-203ENST00000394872 GSNP06396 782 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 RFX5P48382 616 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-203ENST00000394872 CDC16Q13042 620 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 AGAP9Q5VTM2 703 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 ITIH5Q86UX2 942 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 OR2W6PQ8NHA6 318 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 CIPCQ9C0C6 399 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 NMRK1Q9NWW6 199 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 CDY2AQ9Y6F7 541 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 CDY1Q9Y6F8 540 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 BCORL1Q5H9F3 1711 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 APOA1P02647 267 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 SREBF1P36956 1147 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 GEMIN4P57678 1058 aaKnown RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 DDX39BQ13838 428 aaKnown RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 DEPDC1Q5TB30 811 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 KHDRBS2Q5VWX1 349 aaKnown RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 PLD3Q8IV08 490 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 UNC45BQ8IWX7 931 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 PHACTR4Q8IZ21 702 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 SH2D3CQ8N5H7 860 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 ZNF473Q8WTR7 871 aaKnown RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 SYN2Q92777 582 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 SGF29Q96ES7 293 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 OSMRQ99650 979 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 MTG1Q9BT17 334 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 UBXN6Q9BZV1 441 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 NDEL1Q9GZM8 345 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 ZCCHC17Q9NP64 241 aaKnown RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 USP15Q9Y4E8 981 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 C16orf96A6NNT2 1141 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 UBXN8O00124 270 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 DARSP14868 501 aaKnown RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 MMP14P50281 582 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 NCKAP1LP55160 1127 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 CNTN1Q12860 1018 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 NAA30Q147X3 362 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 KYNUQ16719 465 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 LY6KQ17RY6 165 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 ANKS6Q68DC2 871 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 LAYNQ6UX15 382 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 PLEKHM3Q6ZWE6 761 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 EIF3LQ9Y262 564 aaKnown RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 MTO1Q9Y2Z2 717 aaKnown RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 A0A087WZ62 844 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 CYTH3O43739 400 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 F9P00740 461 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 PON1P27169 355 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 SKOR1P84550 965 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 PLCL1Q15111 1095 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 LRRC36Q1X8D7 754 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 AGBL2Q5U5Z8 902 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 BBS7Q8IWZ6 715 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 SAMD3Q8N6K7 520 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 FDXACB1Q9BRP7 624 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-203ENST00000394872 SLC24A3Q9HC58 644 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 MRGBPQ9NV56 204 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 V9GYQ6 96 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 PPP1R3GB7ZBB8 358 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 F8W810 466 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 VPS26AO75436 327 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 MAP3K6O95382 1288 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 GARTP22102 1010 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 RHOAP61586 193 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 POTEAQ6S8J7 498 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 BTNL9Q6UXG8 535 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 FAM172AQ8WUF8 416 aa10.76□□□□□ -0.69
COL4A6-203ENST00000394872 EME1Q96AY2 570 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms