RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 KIF9Q9HAQ2 790 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 CYP39A1Q9NYL5 469 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 hCG_1818297A0A087WSY0 165 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 HSPA4LO95757 839 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 PYGBP11216 843 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 UNGP13051 313 aaPredicted RBP12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 BGNP21810 368 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 ELK3P41970 407 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 RGS7P49802 495 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 ERFP50548 548 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 THOC5Q13769 683 aaKnown RBP12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 HIC1Q14526 733 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 PARP6Q2NL67 630 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 GRAMD1BQ3KR37 738 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 ZPBP2Q6X784 338 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 RAPH1Q70E73 1250 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 SESTD1Q86VW0 696 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 ZNF398Q8TD17 642 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 PLEKHO2Q8TD55 490 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 DEFB129Q9H1M3 183 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 NENFQ9UMX5 172 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 TCEA3O75764 348 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 ACVR2BQ13705 512 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 STILQ15468 1287 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 FSCBQ5H9T9 825 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 WLSQ5T9L3 541 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 FAXCQ5TGI0 409 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 CEP120Q8N960 986 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 GABPB2Q8TAK5 448 aaPredicted RBP12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 MED10Q9BTT4 135 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 APOL6Q9BWW8 343 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 PORCNQ9H237 461 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 DLGAP2Q9P1A6 1054 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 USP18Q9UMW8 372 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 KIAA1551Q9HCM1 1747 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 PRPF4O43172 522 aaKnown RBP eCLIP12.17□□□□□ -0.463e-7■■□□□ 13.1
UBE2D3-209ENST00000394804 XPOTO43592 962 aaKnown RBP12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 GAS2O43903 313 aaKnown RBP12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 PAX7P23759 505 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 BOLA3Q53S33 107 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 CDR2LQ86X02 465 aaPredicted RBP12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 UBA3Q8TBC4 463 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 APOPT1Q96IL0 206 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 SPATA33Q96N06 139 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 CENPKQ9BS16 269 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 LRRC4CQ9HCJ2 640 aa12.17□□□□□ -0.46
UBE2D3-209ENST00000394804 ADCY3O60266 1144 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 SKAP2O75563 359 aaPredicted RBP12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 ACADSP16219 412 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 KCNA3P22001 575 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 MMP8P22894 467 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 DSG3P32926 999 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 GSCP56915 257 aaPredicted RBP12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 JAG1P78504 1218 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 RGS9BPQ6ZS82 235 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 ZNF354CQ86Y25 554 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 APOBEC3FQ8IUX4 373 aaKnown RBP12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 CHST13Q8NET6 341 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 BTBD10Q9BSF8 475 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 TLK1Q9UKI8 766 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 TMEM191CA6NGB0 347 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 WNT10BO00744 389 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 CYP1A1P04798 512 aaPredicted RBP12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 GLRA2P23416 452 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 TYK2P29597 1187 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 TCF7P36402 384 aaPredicted RBP12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 ORC1Q13415 861 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 RASA2Q15283 850 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 PRPF39Q86UA1 669 aaKnown RBP12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 MICALL2Q8IY33 904 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 CYP4X1Q8N118 509 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 OR5B17Q8NGF7 314 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 SERPINI1Q99574 410 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 LRMDAQ9H2I8 198 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 SAE1Q9UBE0 346 aaPredicted RBP12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 C10orf71Q711Q0 1435 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 A8MUI8 341 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 KBTBD13C9JR72 458 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 F5H423 210 aaPredicted RBP12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 WFS1O76024 890 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 SERPINB4P48594 390 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 MROH9Q5TGP6 573 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 MPZL3Q6UWV2 235 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 C4orf22Q6V702 233 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 ASAP3Q8TDY4 903 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 CNPY3Q9BT09 278 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 LRRC4Q9HBW1 653 aa12.16□□□□□ -0.46
UBE2D3-209ENST00000394804 APOC4-APOC2K7ER74 178 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 APOC2P02655 101 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 SERPINB3P29508 390 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 PSMC4P43686 418 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 RBP5P82980 135 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 PTPN11Q06124 597 aaPredicted RBP12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 SLC26A7Q8TE54 656 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 SYT11Q9BT88 431 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 NT5C1AQ9BXI3 368 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 ACSS3Q9H6R3 686 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 C10orf88Q9H8K7 445 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 CYP4F11Q9HBI6 524 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 C2CD2LO14523 706 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms