RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 SLC25A11Q02978 314 aaKnown RBP10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 HP1BP3Q5SSJ5 553 aaPredicted RBP10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 FAM160B1Q5W0V3 765 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 MAP7D3Q8IWC1 876 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 KCTD6Q8NC69 237 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 LRRC39Q96DD0 335 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 ZNF333Q96JL9 665 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 C7orf26Q96N11 449 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 TARS2Q9BW92 718 aaKnown RBP10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 TMEM120AQ9BXJ8 343 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 CADM1Q9BY67 442 aaKnown RBP10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 C2orf40Q9H1Z8 148 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 FAM96AQ9H5X1 160 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 FAM124BQ9H5Z6 455 aaPredicted RBP10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 MKS1Q9NXB0 559 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 PAK5Q9P286 719 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 STX18Q9P2W9 335 aaKnown RBP10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 DNAJB4Q9UDY4 337 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 FBXO40Q9UH90 709 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 PGAP2Q9UHJ9 254 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 SORCS3Q9UPU3 1222 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 ZNF541Q9H0D2 1346 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 GOLGA8SH3BPF8 625 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 GOLGA8MH3BSY2 632 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 OGTO15294 1046 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 MAP3K7O43318 606 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 ADCY3O60266 1144 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 TOMM70O94826 608 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 ATG7O95352 703 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 FESP07332 822 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 ATP4AP20648 1035 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 BRD2P25440 801 aaKnown RBP10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 ICAM3P32942 547 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 BASP1P80723 227 aaKnown RBP10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 ZNF699Q32M78 642 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 FNBP1LQ5T0N5 605 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 ANO7Q6IWH7 933 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 SLC26A11Q86WA9 606 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 TMPRSS6Q8IU80 811 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 ZBTB8OSQ8IWT0 167 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 KIRREL3Q8IZU9 778 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 OXNAD1Q96HP4 312 aaPredicted RBP10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 ANKRD36BP1Q96IX9 119 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 FAM167AQ96KS9 214 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 FAM167BQ9BTA0 163 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 CCDC189A1A4V9 331 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 RAD17O75943 681 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 PSMG1O95456 288 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 SNRPAP09012 282 aaKnown RBP10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 SERPINB9P50453 376 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 RAP1GDS1P52306 607 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 DYNLT1P63172 113 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 OGDHQ02218 1023 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 AP1B1Q10567 949 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 DPYSL3Q14195 570 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 KPNB1Q14974 876 aaKnown RBP10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 RCN1Q15293 331 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 SNX30Q5VWJ9 437 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 ZNF276Q8N554 614 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 TTC39CQ8N584 583 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 OR5B17Q8NGF7 314 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 RFWD2Q8NHY2 731 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 TMEM143Q96AN5 459 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 ZBED3Q96IU2 234 aaPredicted RBP10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 TRAPPC9Q96Q05 1148 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 TSC22D3Q99576 134 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 TCHPQ9BT92 498 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 ACAD9Q9H845 621 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 ZWILCHQ9H900 591 aa10.49□□□□□ -0.73
UBE2D3-208ENST00000394803 WDR91A4D1P6 747 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 H0Y3Z8 333 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 ENTPD5O75356 428 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 LRCH4O75427 683 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 KRT38O76015 456 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 IL18RAPO95256 599 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 RBP3P10745 1247 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 TCF4P15884 667 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 CNTFP26441 200 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 SERPINB3P29508 390 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 ABL2P42684 1182 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 ETV4P43268 484 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 SERPINB4P48594 390 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 SH3BGRP55822 239 aaPredicted RBP10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 YWHAGP61981 247 aaKnown RBP eCLIP10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 PSMC1P62191 440 aaKnown RBP10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 STXBP2Q15833 593 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 TRMT5Q32P41 509 aaKnown RBP10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 DCAF15Q66K64 600 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 SNRNP48Q6IEG0 339 aaKnown RBP10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 LRRC74BQ6ZQY2 392 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 NET1Q7Z628 596 aaPredicted RBP10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 NIM1KQ8IY84 436 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 SCYL3Q8IZE3 742 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 PDCD7Q8N8D1 485 aaKnown RBP10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 DNERQ8NFT8 737 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 CMASQ8NFW8 434 aaPredicted RBP10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 TTC17Q96AE7 1141 aa10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 STN1Q9H668 368 aaKnown RBP10.48□□□□□ -0.73
UBE2D3-208ENST00000394803 NMRK1Q9NWW6 199 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms