RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ARHGAP20Q9P2F6 1191 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 ANAPC5Q9UJX4 755 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 NAGPAQ9UK23 515 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 INPP5FQ9Y2H2 1132 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 A6NJR5 290 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 A8MXQ7 604 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 F8VZ95 297 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 TGFB1I1O43294 461 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 IFNB1P01574 187 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 CTSHP09668 335 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 PSMA2P25787 234 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 MTTPP55157 894 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 TPD52P55327 224 aaPredicted RBP5.94□□□□□ -1.46
RFFL-202ENST00000394597 PPIDQ08752 370 aaKnown RBP5.94□□□□□ -1.46
RFFL-202ENST00000394597 CUL2Q13617 745 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 CYTH1Q15438 398 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 TRIP10Q15642 601 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 TLDC1Q6P9B6 456 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 TMEM110Q86TL2 294 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 THEM5Q8N1Q8 247 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 MREGQ8N565 214 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 ASAP3Q8TDY4 903 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 TAS1R2Q8TE23 839 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 EPS8L3Q8TE67 593 aaKnown RBP5.94□□□□□ -1.46
RFFL-202ENST00000394597 ZNF184Q99676 751 aaPredicted RBP5.94□□□□□ -1.46
RFFL-202ENST00000394597 WNT8AQ9H1J5 351 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 NPHS2Q9NP85 383 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 PDGFCQ9NRA1 345 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 UVRAGQ9P2Y5 699 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 ATP8B3O60423 1300 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 FAM187AA6NFU0 413 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 GIPC1O14908 333 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 KRT1P04264 644 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 RPLP2P05387 115 aaKnown RBP5.94□□□□□ -1.46
RFFL-202ENST00000394597 STAG3L1P0CL83 205 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 TRIP13Q15645 432 aaPredicted RBP5.94□□□□□ -1.46
RFFL-202ENST00000394597 LRRC8BQ6P9F7 803 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 CCNJLQ8IV13 435 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 WDR49Q8IV35 697 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 ABRAQ8N0Z2 381 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 PIAS4Q8N2W9 510 aaPredicted RBP5.94□□□□□ -1.46
RFFL-202ENST00000394597 RIBC1Q8N443 379 aaPredicted RBP5.94□□□□□ -1.46
RFFL-202ENST00000394597 PCSK9Q8NBP7 692 aaKnown RBP5.94□□□□□ -1.46
RFFL-202ENST00000394597 BBOF1Q8ND07 529 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 CCDC124Q96CT7 223 aaKnown RBP5.94□□□□□ -1.46
RFFL-202ENST00000394597 PGBD4Q96DM1 585 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 GLT1D1Q96MS3 346 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 GPR20Q99678 358 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 HAUS8Q9BT25 410 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 GOLPH3Q9H4A6 298 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 PIDD1Q9HB75 910 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 PARVAQ9NVD7 372 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 IP6K2Q9UHH9 426 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 SNX9Q9Y5X1 595 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 ARAP2Q8WZ64 1704 aa5.94□□□□□ -1.46
RFFL-202ENST00000394597 TISP43B9A030 160 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 KBTBD13C9JR72 458 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 M0QYV0 167 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 CLPTM1O96005 669 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 APOEP02649 317 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 WEE2P0C1S8 567 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 MCF2P10911 925 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 ITGA4P13612 1032 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 KRT10P13645 584 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 PSEN2P49810 448 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 MARSP56192 900 aaKnown RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 MFSD10Q14728 455 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 C16orf72Q14CZ0 275 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 STILQ15468 1287 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 HSDL1Q3SXM5 330 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 PRAMEF19Q5SWL8 479 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 PDZD4Q76G19 769 aaPredicted RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 PATL1Q86TB9 770 aaKnown RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.93□□□□□ -1.46
RFFL-202ENST00000394597 SIX6OS1Q8N1H7 587 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 KCTD6Q8NC69 237 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 SLC30A5Q8TAD4 765 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 CPA5Q8WXQ8 436 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 MTBPQ96DY7 904 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 HPDLQ96IR7 371 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 ZBTB45Q96K62 511 aaPredicted RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 TRIM56Q9BRZ2 755 aaKnown RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 MTG1Q9BT17 334 aaPredicted RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 TLR10Q9BXR5 811 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 NIFKQ9BYG3 293 aaKnown RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 FGFBP2Q9BYJ0 223 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 NACA2Q9H009 215 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 PRDM16Q9HAZ2 1276 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 BLOC1S6Q9UL45 172 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 ZNF232Q9UNY5 417 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 MAFBQ9Y5Q3 323 aaPredicted RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 RREB1Q92766 1687 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 COL24A1Q17RW2 1714 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 DHX15O43143 795 aaKnown RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 PRPSAP2O60256 369 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 UNC5CO95185 931 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 SGPL1O95470 568 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 TNFRSF8P28908 595 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 PBX1P40424 430 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 EIF2B2P49770 351 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms