RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CBX6O95503 412 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 ZNF286BP0CG31 522 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 LACTBP83111 547 aaPredicted RBP14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 ARHGAP1Q07960 439 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 ZNF268Q14587 947 aaPredicted RBP14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 TRNP1Q6NT89 227 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 KCNV2Q8TDN2 545 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 FBF1Q8TES7 1133 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 LBHD1Q9BQE6 289 aaPredicted RBP14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 UBN1Q9NPG3 1134 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 ARHGEF3Q9NR81 526 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 ANK1P16157 1881 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 IQCA1LA6NCM1 817 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 C2orf71A6NGG8 1288 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 TYROBPO43914 113 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 ADCYAP1R1P41586 468 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 MORF4L2Q15014 288 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 HIF1AQ16665 826 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 ZC3H18Q86VM9 953 aaKnown RBP14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 FBXO36Q8NEA4 188 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 PTPRN2Q92932 1015 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 NKD2Q969F2 451 aaPredicted RBP14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 MS4A4AQ96JQ5 239 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 TRIM56Q9BRZ2 755 aaKnown RBP14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 ELOVL4Q9GZR5 314 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 CXCL16Q9H2A7 254 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 CHMP2BQ9UQN3 213 aa14.14□□□□□ -0.15
GTF2F1-201ENST00000394456 DOCK3Q8IZD9 2030 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 KDELR1P24390 212 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 CETN2P41208 172 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 RAD23BP54727 409 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 SGSM1Q2NKQ1 1148 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 FAXCQ5TGI0 409 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 TAPT1Q6NXT6 567 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 PPP1R21Q6ZMI0 780 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 C3orf62Q6ZUJ4 267 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 AGGF1Q8N302 714 aaeCLIP14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 SHCBP1Q8NEM2 672 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 BRI3BPQ8WY22 251 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 PRR11Q96HE9 360 aaPredicted RBP14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 SMC6Q96SB8 1091 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 CALN1Q9BXU9 219 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 CXorf56Q9H5V9 222 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 PCDH9Q9HC56 1237 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 GPATCH2LQ9NWQ4 482 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 DNAH12Q6ZR08 3092 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 GPR25O00155 361 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 FAM155BO75949 473 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 ANP32DO95626 131 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 LGALS2P05162 132 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 ITGAVP06756 1048 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 INSRRP14616 1297 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 MIPP30301 263 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 MSH2P43246 934 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 PIGHQ14442 188 aaPredicted RBP14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 C15orf59Q2T9L4 293 aaPredicted RBP14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 ZNF792Q3KQV3 632 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 DRICH1Q6PGQ1 229 aaPredicted RBP14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 CENPUQ71F23 418 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 OTOAQ7RTW8 1153 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 XYLT1Q86Y38 959 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 RFX6Q8HWS3 928 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 AFG1LQ8WV93 481 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 MAGEB5Q9BZ81 275 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 NPHS2Q9NP85 383 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 ERAP1Q9NZ08 941 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 NKX1-2Q9UD57 310 aaPredicted RBP14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 DCTN4Q9UJW0 460 aa14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 DRG1Q9Y295 367 aaKnown RBP14.13□□□□□ -0.15
GTF2F1-201ENST00000394456 CFAP73A6NFT4 308 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 HBP1O60381 514 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 LSM8O95777 96 aaKnown RBP14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 T-ENOLP0DO92 83 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 CCNA1P78396 465 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 BASP1P80723 227 aaKnown RBP14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 MCL1Q07820 350 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 CDO1Q16878 200 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 LRRC38Q5VT99 294 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 RNF43Q68DV7 783 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 NAT8LQ8N9F0 302 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 C1orf127Q8N9H9 656 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 RFWD2Q8NHY2 731 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 PYROXD1Q8WU10 500 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 PPP1R13LQ8WUF5 828 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 NSMCE1Q8WV22 266 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 PAFAH2Q99487 392 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 KANSL3Q9P2N6 904 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 GAS2O43903 313 aaKnown RBP14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 C22orf31O95567 290 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 ITGB3P05106 788 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 CYP3A5P20815 502 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 LMNB2Q03252 620 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 SPARCL1Q14515 664 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 ATF7IP2Q5U623 682 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 TLDC1Q6P9B6 456 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 MAMDC4Q6UXC1 1216 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 SLC4A11Q8NBS3 891 aa14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 ZNF75CPQ92670 426 aaPredicted RBP14.12□□□□□ -0.15
GTF2F1-201ENST00000394456 CPB2Q96IY4 423 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms