RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 BEND6Q5SZJ8 279 aaPredicted RBP20.68■□□□□ 0.9
RAB5C-202ENST00000393860 DCLRE1AQ6PJP8 1040 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 CCNI2Q6ZMN8 369 aaPredicted RBP20.68■□□□□ 0.9
RAB5C-202ENST00000393860 NDRG1Q92597 394 aaKnown RBP20.68■□□□□ 0.9
RAB5C-202ENST00000393860 ZNF333Q96JL9 665 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 GDAP1L1Q96MZ0 367 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 PLVAPQ9BX97 442 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 RHOBTB2Q9BYZ6 727 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 PCDH10Q9P2E7 1040 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 PCSK1NQ9UHG2 260 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 LCMT1Q9UIC8 334 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 ATP11BQ9Y2G3 1177 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 PRG3Q9Y2Y8 225 aaPredicted RBP20.68■□□□□ 0.9
RAB5C-202ENST00000393860 FAM163BP0C2L3 166 aa20.67■□□□□ 0.9
RAB5C-202ENST00000393860 MCM3P25205 808 aa20.67■□□□□ 0.9
RAB5C-202ENST00000393860 IL1R2P27930 398 aa20.67■□□□□ 0.9
RAB5C-202ENST00000393860 MAP3K7CLP57077 242 aa20.67■□□□□ 0.9
RAB5C-202ENST00000393860 CLUL1Q15846 466 aa20.67■□□□□ 0.9
RAB5C-202ENST00000393860 KCNT1Q5JUK3 1230 aa20.67■□□□□ 0.9
RAB5C-202ENST00000393860 PIGZQ86VD9 579 aa20.67■□□□□ 0.9
RAB5C-202ENST00000393860 FNIP1Q8TF40 1166 aa20.67■□□□□ 0.9
RAB5C-202ENST00000393860 STK32AQ8WU08 396 aa20.67■□□□□ 0.9
RAB5C-202ENST00000393860 CASKIN2Q8WXE0 1202 aa20.67■□□□□ 0.9
RAB5C-202ENST00000393860 ZBTB9Q96C00 473 aa20.67■□□□□ 0.9
RAB5C-202ENST00000393860 PCED1BQ96HM7 432 aa20.67■□□□□ 0.9
RAB5C-202ENST00000393860 CFAP57Q96MR6 1250 aa20.67■□□□□ 0.9
RAB5C-202ENST00000393860 TMEM209Q96SK2 561 aa20.67■□□□□ 0.9
RAB5C-202ENST00000393860 TRIM51Q9BSJ1 452 aa20.67■□□□□ 0.9
RAB5C-202ENST00000393860 DUSP16Q9BY84 665 aa20.67■□□□□ 0.9
RAB5C-202ENST00000393860 HCSTQ9UBK5 93 aa20.67■□□□□ 0.9
RAB5C-202ENST00000393860 PCDHB7Q9Y5E2 793 aa20.67■□□□□ 0.9
RAB5C-202ENST00000393860 C2CD4BA6NLJ0 364 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 DCDC2CA8MYV0 355 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 PHF2O75151 1096 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 TUBBP07437 444 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 PDGFRAP16234 1089 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 BCAR1P56945 870 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 SLC25A11Q02978 314 aaKnown RBP20.66■□□□□ 0.9
RAB5C-202ENST00000393860 DSC1Q08554 894 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 TTC27Q6P3X3 843 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 CLEC20AQ6ZU45 233 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 ANKRD33Q7Z3H0 272 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 CTU1Q7Z7A3 348 aaKnown RBP20.66■□□□□ 0.9
RAB5C-202ENST00000393860 METTL23Q86XA0 190 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 COLGALT2Q8IYK4 626 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 EXD1Q8NHP7 514 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 C1orf54Q8WWF1 131 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 IFT81Q8WYA0 676 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 KHSRPQ92945 711 aaKnown RBP eCLIP20.66■□□□□ 0.9
RAB5C-202ENST00000393860 MAGOHBQ96A72 148 aaKnown RBP20.66■□□□□ 0.9
RAB5C-202ENST00000393860 SLITRK6Q9H5Y7 841 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 CDH9Q9ULB4 789 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 M0QZQ0 153 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 FSCN2O14926 492 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 XPO1O14980 1071 aaKnown RBP20.66■□□□□ 0.9
RAB5C-202ENST00000393860 KRT10P13645 584 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 NPR3P17342 541 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 PLA2G4AP47712 749 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 CARSP49589 748 aaKnown RBP20.66■□□□□ 0.9
RAB5C-202ENST00000393860 ZNF143P52747 638 aaPredicted RBP20.66■□□□□ 0.9
RAB5C-202ENST00000393860 CACNA2D1P54289 1103 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 ATP11AP98196 1134 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 ADIGQ0VDE8 80 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 KAZNQ674X7 775 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 FAM35AQ86V20 835 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 ABI1Q8IZP0 508 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 HNRNPLLQ8WVV9 542 aaKnown RBP20.66■□□□□ 0.9
RAB5C-202ENST00000393860 RAPGEF5Q92565 580 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 FAM193BQ96PV7 902 aaPredicted RBP20.66■□□□□ 0.9
RAB5C-202ENST00000393860 FAM118BQ9BPY3 351 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 GDF3Q9NR23 364 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 MTUS1Q9ULD2 1270 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 LRFN2Q9ULH4 789 aa20.66■□□□□ 0.9
RAB5C-202ENST00000393860 SASH3O75995 380 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 MIPP30301 263 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 SNX1Q13596 522 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 MFSD7Q6UXD7 560 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 OR10T2Q8NGX3 314 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 CCDC26Q8TAB7 109 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 ATG4AQ8WYN0 398 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 MYLPFQ96A32 169 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 SUSD3Q96L08 255 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 SLITRK1Q96PX8 696 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 OSBPL8Q9BZF1 889 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 TMEM30AQ9NV96 361 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.65■□□□□ 0.9
RAB5C-202ENST00000393860 LRRD1A4D1F6 860 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 AP1G2O75843 785 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 FAM200BP0CF97 657 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 PCSK1P29120 753 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 TNNT3P45378 269 aaPredicted RBP20.65■□□□□ 0.9
RAB5C-202ENST00000393860 KCNJ1P48048 391 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 DR1Q01658 176 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 ADCY2Q08462 1091 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 CCDC14Q49A88 953 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 ODF2Q5BJF6 829 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 OVOS1Q6IE37 1185 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 DDX42Q86XP3 938 aaKnown RBP eCLIP20.65■□□□□ 0.9
RAB5C-202ENST00000393860 IFT20Q8IY31 132 aa20.65■□□□□ 0.9
RAB5C-202ENST00000393860 MYCBPAPQ8TBZ2 947 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms